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A powerful procedure that controls the false discovery rate with directional information

Zhaoyang Tian, Kun Liang and Pengfei Li

Biometrics, 2021, vol. 77, issue 1, 212-222

Abstract: In many multiple testing applications in genetics, the signs of the test statistics provide useful directional information, such as whether genes are potentially up‐ or down‐regulated between two experimental conditions. However, most existing procedures that control the false discovery rate (FDR) are P‐value based and ignore such directional information. We introduce a novel procedure, the signed‐knockoff procedure, to utilize the directional information and control the FDR in finite samples. We demonstrate the power advantage of our procedure through simulation studies and two real applications.

Date: 2021
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https://doi.org/10.1111/biom.13277

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