Split selectable markers

Nathaniel Jillette, Menghan Du, Jacqueline Jufen Zhu, Peter Cardoz and Albert Wu Cheng ()
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Nathaniel Jillette: The Jackson Laboratory for Genomic Medicine
Menghan Du: The Jackson Laboratory for Genomic Medicine
Jacqueline Jufen Zhu: The Jackson Laboratory for Genomic Medicine
Peter Cardoz: The Jackson Laboratory for Genomic Medicine
Albert Wu Cheng: The Jackson Laboratory for Genomic Medicine

Nature Communications, 2019, vol. 10, issue 1, 1-8

Abstract: Abstract Selectable markers are widely used in transgenesis and genome editing for selecting engineered cells with a desired genotype but the variety of markers is limited. Here we present split selectable markers that each allow for selection of multiple “unlinked” transgenes in the context of lentivirus-mediated transgenesis as well as CRISPR-Cas-mediated knock-ins. Split marker gene segments fused to protein splicing elements called “inteins” can be separately co-segregated with different transgenic vectors, and rejoin via protein trans-splicing to reconstitute a full-length marker protein in host cells receiving all intended vectors. Using a lentiviral system, we create and validate 2-split Hygromycin, Puromycin, Neomycin and Blasticidin resistance genes as well as mScarlet fluorescent proteins. By combining split points, we create 3- and 6-split Hygromycin resistance genes, demonstrating that higher-degree split markers can be generated by a “chaining” design. We adapt the split marker system for selecting biallelically engineered cells after CRISPR gene editing. Future engineering of split markers may allow selection of a higher number of genetic modifications in target cells.

Date: 2019
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DOI: 10.1038/s41467-019-12891-2

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