Towards a unified open access dataset of molecular interactions

Pablo Porras, Elisabet Barrera, Alan Bridge, Noemi del-Toro, Gianni Cesareni, Margaret Duesbury, Henning Hermjakob, Marta Iannuccelli, Igor Jurisica, Max Kotlyar, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit Meldal, Bindu Nanduri, Kalpana Paneerselvam, Simona Panni, Chiara Pastrello, Matteo Pellegrini, Livia Perfetto, Negin Rahimzadeh, Prashansa Ratan, Sylvie Ricard-Blum, Lukasz Salwinski, Gautam Shirodkar, Anjalia Shrivastava and Sandra Orchard ()
Additional contact information
Pablo Porras: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Elisabet Barrera: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Alan Bridge: SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire
Noemi del-Toro: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Gianni Cesareni: University of Rome Tor Vergata
Margaret Duesbury: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Henning Hermjakob: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Marta Iannuccelli: University of Rome Tor Vergata
Igor Jurisica: Schroeder Arthritis Institute, and Krembil Research Institute, University Health Network
Max Kotlyar: Schroeder Arthritis Institute, and Krembil Research Institute, University Health Network
Luana Licata: University of Rome Tor Vergata
Ruth C. Lovering: Functional Gene Annotation, Preclinical and Fundamental Science, UCL Institute of Cardiovascular Science, University College London
David J. Lynn: Computational and Systems Biology Program, Precision Medicine Theme, South Australian Health and Medical Research Institute
Birgit Meldal: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Bindu Nanduri: Institute for Genomics, Biocomputing and Biotechnology, Mississippi State University
Kalpana Paneerselvam: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Simona Panni: Università della Calabria, Dipartimento di Biologia, Ecologia e Scienze della Terra
Chiara Pastrello: Schroeder Arthritis Institute, and Krembil Research Institute, University Health Network
Matteo Pellegrini: Department of Molecular, Cell and Developmental Biology, UCLA
Livia Perfetto: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Negin Rahimzadeh: UCLA-DOE Institute, University of California
Prashansa Ratan: UCLA-DOE Institute, University of California
Sylvie Ricard-Blum: ICBMS, UMR 5246 University Lyon 1 - CNRS, Univ. Lyon
Lukasz Salwinski: UCLA-DOE Institute, University of California
Gautam Shirodkar: UCLA-DOE Institute, University of California
Anjalia Shrivastava: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton
Sandra Orchard: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Campus, Hinxton

Nature Communications, 2020, vol. 11, issue 1, 1-12

Abstract: Abstract The International Molecular Exchange (IMEx) Consortium provides scientists with a single body of experimentally verified protein interactions curated in rich contextual detail to an internationally agreed standard. In this update to the work of the IMEx Consortium, we discuss how this initiative has been working in practice, how it has ensured database sustainability, and how it is meeting emerging annotation challenges through the introduction of new interactor types and data formats. Additionally, we provide examples of how IMEx data are being used by biomedical researchers and integrated in other bioinformatic tools and resources.

Date: 2020
References: Add references at CitEc
Citations:

Downloads: (external link)
https://www.nature.com/articles/s41467-020-19942-z Abstract (text/html)

Related works:
This item may be available elsewhere in EconPapers: Search for items with the same title.

Export reference: BibTeX RIS (EndNote, ProCite, RefMan) HTML/Text

Persistent link: https://EconPapers.repec.org/RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-19942-z

Ordering information: This journal article can be ordered from
https://www.nature.com/ncomms/

DOI: 10.1038/s41467-020-19942-z

Access Statistics for this article

Nature Communications is currently edited by Nathalie Le Bot, Enda Bergin and Fiona Gillespie

More articles in Nature Communications from Nature
Bibliographic data for series maintained by Sonal Shukla () and Springer Nature Abstracting and Indexing ().