The singularity response reveals entrainment properties of the plant circadian clock

Kosaku Masuda, Isao T. Tokuda, Norihito Nakamichi and Hirokazu Fukuda ()
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Kosaku Masuda: Osaka Prefecture University
Isao T. Tokuda: Ritsumeikan University
Norihito Nakamichi: Nagoya University
Hirokazu Fukuda: Osaka Prefecture University

Nature Communications, 2021, vol. 12, issue 1, 1-7

Abstract: Abstract Circadian clocks allow organisms to synchronize their physiological processes to diurnal variations. A phase response curve allows researchers to understand clock entrainment by revealing how signals adjust clock genes differently according to the phase in which they are applied. Comprehensively investigating these curves is difficult, however, because of the cost of measuring them experimentally. Here we demonstrate that fundamental properties of the curve are recoverable from the singularity response, which is easily measured by applying a single stimulus to a cellular network in a desynchronized state (i.e. singularity). We show that the singularity response of Arabidopsis to light/dark and temperature stimuli depends on the properties of the phase response curve for these stimuli. The measured singularity responses not only allow the curves to be precisely reconstructed but also reveal organ-specific properties of the plant circadian clock. The method is not only simple and accurate, but also general and applicable to other coupled oscillator systems as long as the oscillators can be desynchronized. This simplified method may allow the entrainment properties of the circadian clock of both plants and other species in nature.

Date: 2021
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DOI: 10.1038/s41467-021-21167-7

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