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Rad27 and Exo1 function in different excision pathways for mismatch repair in Saccharomyces cerevisiae

Felipe A. Calil, Bin-Zhong Li, Kendall A. Torres, Katarina Nguyen, Nikki Bowen, Christopher D. Putnam and Richard D. Kolodner ()
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Felipe A. Calil: Ludwig Institute for Cancer Research, University of California School of Medicine
Bin-Zhong Li: Ludwig Institute for Cancer Research, University of California School of Medicine
Kendall A. Torres: Ludwig Institute for Cancer Research, University of California School of Medicine
Katarina Nguyen: Ludwig Institute for Cancer Research, University of California School of Medicine
Nikki Bowen: Ludwig Institute for Cancer Research, University of California School of Medicine
Christopher D. Putnam: Ludwig Institute for Cancer Research, University of California School of Medicine
Richard D. Kolodner: Ludwig Institute for Cancer Research, University of California School of Medicine

Nature Communications, 2021, vol. 12, issue 1, 1-10

Abstract: Abstract Eukaryotic DNA Mismatch Repair (MMR) involves redundant exonuclease 1 (Exo1)-dependent and Exo1-independent pathways, of which the Exo1-independent pathway(s) is not well understood. The exo1Δ440-702 mutation, which deletes the MutS Homolog 2 (Msh2) and MutL Homolog 1 (Mlh1) interacting peptides (SHIP and MIP boxes, respectively), eliminates the Exo1 MMR functions but is not lethal in combination with rad27Δ mutations. Analyzing the effect of different combinations of the exo1Δ440-702 mutation, a rad27Δ mutation and the pms1-A99V mutation, which inactivates an Exo1-independent MMR pathway, demonstrated that each of these mutations inactivates a different MMR pathway. Furthermore, it was possible to reconstitute a Rad27- and Msh2-Msh6-dependent MMR reaction in vitro using a mispaired DNA substrate and other MMR proteins. Our results demonstrate Rad27 defines an Exo1-independent eukaryotic MMR pathway that is redundant with at least two other MMR pathways.

Date: 2021
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DOI: 10.1038/s41467-021-25866-z

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