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Palmitoylation targets the calcineurin phosphatase to the phosphatidylinositol 4-kinase complex at the plasma membrane

Idil Ulengin-Talkish, Matthew A. H. Parson, Meredith L. Jenkins, Jagoree Roy, Alexis Z. L. Shih, Nicole St-Denis, Gergo Gulyas, Tamas Balla, Anne-Claude Gingras, Péter Várnai, Elizabeth Conibear, John E. Burke and Martha S. Cyert ()
Additional contact information
Idil Ulengin-Talkish: Stanford University
Matthew A. H. Parson: Department of Biochemistry and Microbiology, University of Victoria
Meredith L. Jenkins: Department of Biochemistry and Microbiology, University of Victoria
Jagoree Roy: Stanford University
Alexis Z. L. Shih: University of British Columbia
Nicole St-Denis: University of Toronto
Gergo Gulyas: National Institutes of Health
Tamas Balla: National Institutes of Health
Anne-Claude Gingras: University of Toronto
Péter Várnai: Semmelweis University
Elizabeth Conibear: University of British Columbia
John E. Burke: Department of Biochemistry and Microbiology, University of Victoria
Martha S. Cyert: Stanford University

Nature Communications, 2021, vol. 12, issue 1, 1-19

Abstract: Abstract Calcineurin, the conserved protein phosphatase and target of immunosuppressants, is a critical mediator of Ca2+ signaling. Here, to discover calcineurin-regulated processes we examined an understudied isoform, CNAβ1. We show that unlike canonical cytosolic calcineurin, CNAβ1 localizes to the plasma membrane and Golgi due to palmitoylation of its divergent C-terminal tail, which is reversed by the ABHD17A depalmitoylase. Palmitoylation targets CNAβ1 to a distinct set of membrane-associated interactors including the phosphatidylinositol 4-kinase (PI4KA) complex containing EFR3B, PI4KA, TTC7B and FAM126A. Hydrogen-deuterium exchange reveals multiple calcineurin-PI4KA complex contacts, including a calcineurin-binding peptide motif in the disordered tail of FAM126A, which we establish as a calcineurin substrate. Calcineurin inhibitors decrease PI4P production during Gq-coupled GPCR signaling, suggesting that calcineurin dephosphorylates and promotes PI4KA complex activity. In sum, this work discovers a calcineurin-regulated signaling pathway which highlights the PI4KA complex as a regulatory target and reveals that dynamic palmitoylation confers unique localization, substrate specificity and regulation to CNAβ1.

Date: 2021
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Persistent link: https://EconPapers.repec.org/RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-26326-4

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DOI: 10.1038/s41467-021-26326-4

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