Programmable viscoelasticity in protein-RNA condensates with disordered sticker-spacer polypeptides

Ibraheem Alshareedah, Mahdi Muhammad Moosa, Matthew Pham, Davit A. Potoyan () and Priya R. Banerjee ()
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Ibraheem Alshareedah: University at Buffalo
Mahdi Muhammad Moosa: University at Buffalo
Matthew Pham: Iowa State University
Davit A. Potoyan: Iowa State University
Priya R. Banerjee: University at Buffalo

Nature Communications, 2021, vol. 12, issue 1, 1-14

Abstract: Abstract Liquid-liquid phase separation of multivalent proteins and RNAs drives the formation of biomolecular condensates that facilitate membrane-free compartmentalization of subcellular processes. With recent advances, it is becoming increasingly clear that biomolecular condensates are network fluids with time-dependent material properties. Here, employing microrheology with optical tweezers, we reveal molecular determinants that govern the viscoelastic behavior of condensates formed by multivalent Arg/Gly-rich sticker-spacer polypeptides and RNA. These condensates behave as Maxwell fluids with an elastically-dominant rheological response at shorter timescales and a liquid-like behavior at longer timescales. The viscous and elastic regimes of these condensates can be tuned by the polypeptide and RNA sequences as well as their mixture compositions. Our results establish a quantitative link between the sequence- and structure-encoded biomolecular interactions at the microscopic scale and the rheological properties of the resulting condensates at the mesoscale, enabling a route to systematically probe and rationally engineer biomolecular condensates with programmable mechanics.

Date: 2021
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DOI: 10.1038/s41467-021-26733-7

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