AusTrakka: Fast-tracking nationalized genomics surveillance in response to the COVID-19 pandemic

Tuyet Hoang, Anders Gonçalves Silva, Amy V. Jennison, Deborah A. Williamson, Benjamin P. Howden () and Torsten Seemann
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Tuyet Hoang: The University of Melbourne at The Peter Doherty Institute for Infection and Immunity
Anders Gonçalves Silva: The University of Melbourne at The Peter Doherty Institute for Infection and Immunity
Amy V. Jennison: Public Health Microbiology, Queensland Public Health and Infectious Diseases Reference Genomics (Q-PHIRE Genomics), Forensic and Scientific Services, Queensland Department of Health
Deborah A. Williamson: Victorian Infectious Diseases Reference Laboratory, Royal Melbourne Hospital at The Peter Doherty Institute for Infection and Immunity
Benjamin P. Howden: The University of Melbourne at The Peter Doherty Institute for Infection and Immunity
Torsten Seemann: The University of Melbourne at The Peter Doherty Institute for Infection and Immunity

Nature Communications, 2022, vol. 13, issue 1, 1-4

Abstract: The COVID-19 pandemic has driven demand for integrated genomics, resulting in fast-tracked development of AusTrakka, Australia’s pathogen genomics platform. This facilitated rapid data sharing, democratised access to computational and bioinformatic resources and expertise, and achieved national real-time genomic surveillance.

Date: 2022
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DOI: 10.1038/s41467-022-28529-9

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