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Structure of the membrane-bound formate hydrogenlyase complex from Escherichia coli

Ralf Steinhilper, Gabriele Höff, Johann Heider and Bonnie J. Murphy ()
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Ralf Steinhilper: Max Planck Institute of Biophysics
Gabriele Höff: Philipps University Marburg
Johann Heider: Philipps University Marburg
Bonnie J. Murphy: Max Planck Institute of Biophysics

Nature Communications, 2022, vol. 13, issue 1, 1-13

Abstract: Abstract The prototypical hydrogen-producing enzyme, the membrane-bound formate hydrogenlyase (FHL) complex from Escherichia coli, links formate oxidation at a molybdopterin-containing formate dehydrogenase to proton reduction at a [NiFe] hydrogenase. It is of intense interest due to its ability to efficiently produce H2 during fermentation, its reversibility, allowing H2-dependent CO2 reduction, and its evolutionary link to respiratory complex I. FHL has been studied for over a century, but its atomic structure remains unknown. Here we report cryo-EM structures of FHL in its aerobically and anaerobically isolated forms at resolutions reaching 2.6 Å. This includes well-resolved density for conserved loops linking the soluble and membrane arms believed to be essential in coupling enzymatic turnover to ion translocation across the membrane in the complex I superfamily. We evaluate possible structural determinants of the bias toward hydrogen production over its oxidation and describe an unpredicted metal-binding site near the interface of FdhF and HycF subunits that may play a role in redox-dependent regulation of FdhF interaction with the complex.

Date: 2022
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DOI: 10.1038/s41467-022-32831-x

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