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Discovery and biosynthesis of karnamicins as angiotensin converting enzyme inhibitors

Zhiyin Yu, Jian-Ping Huang, Jing Yang, Chongxi Liu, Yijun Yan, Li Wang, Junwei Zhao, Yin Chen, Wensheng Xiang () and Sheng-Xiong Huang ()
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Zhiyin Yu: Chengdu University of Traditional Chinese Medicine
Jian-Ping Huang: Chengdu University of Traditional Chinese Medicine
Jing Yang: Chinese Academy of Sciences
Chongxi Liu: Northeast Agricultural University
Yijun Yan: Chinese Academy of Sciences
Li Wang: Chengdu University of Traditional Chinese Medicine
Junwei Zhao: Northeast Agricultural University
Yin Chen: Chinese Academy of Sciences
Wensheng Xiang: Northeast Agricultural University
Sheng-Xiong Huang: Chengdu University of Traditional Chinese Medicine

Nature Communications, 2023, vol. 14, issue 1, 1-11

Abstract: Abstract Angiotensin-converting enzyme inhibitors are widely used for treatment of hypertension and related diseases. Here, six karnamicins E1-E6 (1–6), which bear fully substituted hydroxypyridine and thiazole moieties are characterized from the rare actinobacterium Lechevalieria rhizosphaerae NEAU-A2. Through a combination of isotopic labeling, genome mining, and enzymatic characterization studies, the programmed assembly of the fully substituted hydroxypyridine moiety in karnamicin is proposed to be due to sequential operation of a hybrid polyketide synthase-nonribosomal peptide synthetase, two regioselective pyridine ring flavoprotein hydroxylases, and a methyltransferase. Based on AlphaFold protein structures predictions, molecular docking, and site-directed mutagenesis, we find that two pyridine hydroxylases deploy active site residues distinct from other flavoprotein monooxygenases to direct the chemo- and regioselective hydroxylation of the pyridine nucleus. Pleasingly, karnamicins show significant angiotensin-converting enzyme inhibitory activity with IC50 values ranging from 0.24 to 5.81 μM, suggesting their potential use for the treatment of hypertension and related diseases.

Date: 2023
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DOI: 10.1038/s41467-023-35829-1

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