Systematic review of cnidarian microbiomes reveals insights into the structure, specificity, and fidelity of marine associations

M. McCauley (), T. L. Goulet, C. R. Jackson and S. Loesgen
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M. McCauley: University of Florida
T. L. Goulet: University of Mississippi
C. R. Jackson: University of Mississippi
S. Loesgen: University of Florida

Nature Communications, 2023, vol. 14, issue 1, 1-15

Abstract: Abstract Microorganisms play essential roles in the health and resilience of cnidarians. Understanding the factors influencing cnidarian microbiomes requires cross study comparisons, yet the plethora of protocols used hampers dataset integration. We unify 16S rRNA gene sequences from cnidarian microbiome studies under a single analysis pipeline. We reprocess 12,010 cnidarian microbiome samples from 186 studies, alongside 3,388 poriferan, 370 seawater samples, and 245 cultured Symbiodiniaceae, unifying ~6.5 billion sequence reads. Samples are partitioned by hypervariable region and sequencing platform to reduce sequencing variability. This systematic review uncovers an incredible diversity of 86 archaeal and bacterial phyla associated with Cnidaria, and highlights key bacteria hosted across host sub-phylum, depth, and microhabitat. Shallow (

Date: 2023
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DOI: 10.1038/s41467-023-39876-6

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