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Structural basis for negative regulation of the Escherichia coli maltose system

Yuang Wu, Yue Sun, Evelyne Richet, Zhifu Han and Jijie Chai ()
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Yuang Wu: University of Cologne
Yue Sun: Tsinghua University
Evelyne Richet: Université Paris Cité, CNRS UMR6047, INSERM U1306, Unité Biologie et génétique de la paroi bactérienne
Zhifu Han: Tsinghua University
Jijie Chai: University of Cologne

Nature Communications, 2023, vol. 14, issue 1, 1-15

Abstract: Abstract Proteins from the signal transduction ATPases with numerous domains (STAND) family are known to play an important role in innate immunity. However, it remains less well understood how they function in transcriptional regulation. MalT is a bacterial STAND that controls the Escherichia coli maltose system. Inactive MalT is sequestered by different inhibitory proteins such as MalY. Here, we show that MalY interacts with one oligomerization interface of MalT to form a 2:2 complex. MalY represses MalT activity by blocking its oligomerization and strengthening ADP-mediated MalT autoinhibition. A loop region N-terminal to the nucleotide-binding domain (NBD) of MalT has a dual role in mediating MalT autoinhibition and activation. Structural comparison shows that ligand-binding induced oligomerization is required for stabilizing the C-terminal domains and conferring DNA-binding activity. Together, our study reveals the mechanism whereby a prokaryotic STAND is inhibited by a repressor protein and offers insights into signaling by STAND transcription activators.

Date: 2023
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DOI: 10.1038/s41467-023-40447-y

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