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MHC-I upregulation safeguards neoplastic T cells in the skin against NK cell-mediated eradication in mycosis fungoides

Yun-Tsan Chang, Pacôme Prompsy, Susanne Kimeswenger, Yi-Chien Tsai, Desislava Ignatova, Olesya Pavlova, Christoph Iselin, Lars E. French, Mitchell P. Levesque, François Kuonen, Malgorzata Bobrowicz, Patrick M. Brunner, Steve Pascolo, Wolfram Hoetzenecker () and Emmanuella Guenova ()
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Yun-Tsan Chang: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne
Pacôme Prompsy: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne
Susanne Kimeswenger: Medical Faculty, Johannes Kepler University
Yi-Chien Tsai: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne
Desislava Ignatova: University Hospital of Zurich and Faculty of Medicine, University of Zurich
Olesya Pavlova: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne
Christoph Iselin: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne
Lars E. French: Ludwig-Maximilians-University of Munich
Mitchell P. Levesque: University Hospital of Zurich and Faculty of Medicine, University of Zurich
François Kuonen: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne
Malgorzata Bobrowicz: Medical University of Warsaw
Patrick M. Brunner: Icahn School of Medicine at Mount Sinai
Steve Pascolo: University Hospital of Zurich and Faculty of Medicine, University of Zurich
Wolfram Hoetzenecker: Medical Faculty, Johannes Kepler University
Emmanuella Guenova: Lausanne University Hospital (CHUV) and Faculty of Biology and Medicine, University of Lausanne

Nature Communications, 2024, vol. 15, issue 1, 1-18

Abstract: Abstract Cancer-associated immune dysfunction is a major challenge for effective therapies. The emergence of antibodies targeting tumor cell-surface antigens led to advancements in the treatment of hematopoietic malignancies, particularly blood cancers. Yet their impact is constrained against tumors of hematopoietic origin manifesting in the skin. In this study, we employ a clonality-supervised deep learning methodology to dissect key pathological features implicated in mycosis fungoides, the most common cutaneous T-cell lymphoma. Our investigations unveil the prominence of the IL-32β–major histocompatibility complex (MHC)-I axis as a critical determinant in tumor T-cell immune evasion within the skin microenvironment. In patients’ skin, we find MHC-I to detrimentally impact the functionality of natural killer (NK) cells, diminishing antibody-dependent cellular cytotoxicity and promoting resistance of tumor skin T-cells to cell-surface targeting therapies. Through murine experiments in female mice, we demonstrate that disruption of the MHC-I interaction with NK cell inhibitory Ly49 receptors restores NK cell anti-tumor activity and targeted T-cell lymphoma elimination in vivo. These findings underscore the significance of attenuating the MHC-I-dependent immunosuppressive networks within skin tumors. Overall, our study introduces a strategy to reinvigorate NK cell-mediated anti-tumor responses to overcome treatment resistance to existing cell-surface targeted therapies for skin lymphoma.

Date: 2024
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DOI: 10.1038/s41467-024-45083-8

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