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Lipid-polymer nanoparticles to probe the native-like environment of intramembrane rhomboid protease GlpG and its activity

Henry Sawczyc, Takashi Tatsuta, Carl Öster, Spyridon Kosteletos, Sascha Lange, Claudia Bohg, Thomas Langer and Adam Lange ()
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Henry Sawczyc: Leibniz-Forschungsinstitut für Molekulare Pharmakologie
Takashi Tatsuta: Department of Mitochondrial Proteostasis
Carl Öster: Leibniz-Forschungsinstitut für Molekulare Pharmakologie
Spyridon Kosteletos: Leibniz-Forschungsinstitut für Molekulare Pharmakologie
Sascha Lange: Leibniz-Forschungsinstitut für Molekulare Pharmakologie
Claudia Bohg: Leibniz-Forschungsinstitut für Molekulare Pharmakologie
Thomas Langer: Department of Mitochondrial Proteostasis
Adam Lange: Leibniz-Forschungsinstitut für Molekulare Pharmakologie

Nature Communications, 2024, vol. 15, issue 1, 1-9

Abstract: Abstract Polymers can facilitate detergent-free extraction of membrane proteins into nanodiscs (e.g., SMALPs, DIBMALPs), incorporating both integral membrane proteins as well as co-extracted native membrane lipids. Lipid-only SMALPs and DIBMALPs have been shown to possess a unique property; the ability to exchange lipids through ‘collisional lipid mixing’. Here we expand upon this mixing to include protein-containing DIBMALPs, using the rhomboid protease GlpG. Through lipidomic analysis before and after incubation with DMPC or POPC DIBMALPs, we show that lipids are rapidly exchanged between protein and lipid-only DIBMALPs, and can be used to identify bound or associated lipids through ‘washing-in’ exogenous lipids. Additionally, through the requirement of rhomboid proteases to cleave intramembrane substrates, we show that this mixing can be performed for two protein-containing DIBMALP populations, assessing the native function of intramembrane proteolysis and demonstrating that this mixing has no deleterious effects on protein stability or structure.

Date: 2024
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DOI: 10.1038/s41467-024-51989-0

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