Bacteria encode post-mortem protein catabolism that enables altruistic nutrient recycling

Savannah E. R. Gibson, Isabella Frost, Stephen J. Hierons, Tessa Moses, Wilson C. K. Poon, Stuart A. West and Martin J. Cann ()
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Savannah E. R. Gibson: Durham University
Isabella Frost: Durham University
Stephen J. Hierons: Durham University
Tessa Moses: The University of Edinburgh
Wilson C. K. Poon: The University of Edinburgh
Stuart A. West: University of Oxford
Martin J. Cann: Durham University

Nature Communications, 2025, vol. 16, issue 1, 1-12

Abstract: Abstract Bacterial death is critical in nutrient recycling. However, the underlying mechanisms that permit macromolecule recycling after bacterial death are largely unknown. We demonstrate that bacteria encode post-mortem protein catabolism via Lon protease released from the dead bacteria. Growth assays reveal that the lysate of Lon protease-null bacteria does not provide a growth benefit to wild type cells. This deficiency is reversed with exogenous recombinant Lon protease, confirming its post-mortem role and is independent of Lon ATPase activity. Biochemistry, growth assays and metabolomics demonstrate that Lon protease facilitates peptide nutrient release, benefitting living cells and acting as a cooperative public good. We also show that the production of Lon protease cannot be explained by a personal benefit to living cells. Although Lon protease can also provide a benefit to living cells under stressful conditions by helping control protein quality, this private benefit does not outweigh the cost under the conditions examined. These results suggest that Lon protease represents a post-mortem adaptation that can potentially be explained by considering the post-mortem indirect benefit to other cells (kin selection). This discovery highlights an unexpected post-mortem biochemistry, reshaping our understanding of nutrient recycling.

Date: 2025
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DOI: 10.1038/s41467-025-56761-6

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