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Multiphasic condensates formed with mono-component of tetrapeptides via phase separation

Laicheng Zhou, Longchen Zhu, Cong Wang, Tengyan Xu, Jing Wang, Bin Zhang (), Xin Zhang () and Huaimin Wang ()
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Laicheng Zhou: Zhejiang University
Longchen Zhu: Westlake University
Cong Wang: Massachusetts Institute of Technology
Tengyan Xu: Westlake University
Jing Wang: Westlake University
Bin Zhang: Massachusetts Institute of Technology
Xin Zhang: Westlake University
Huaimin Wang: Westlake University

Nature Communications, 2025, vol. 16, issue 1, 1-14

Abstract: Abstract Biomolecular condensates, formed by liquid-liquid phase separation of biomacromolecules, play crucial roles in regulating physiological events in biological systems. While multiphasic condensates have been extensively studied, those derived from a single component of short peptides have not yet been reported. Here, we report the symmetrical core-shell structural biomolecular condensates formed with a programmable tetrapeptide library via phase separation. Our findings reveal that tryptophan is essential for core-shell structure formation due to its strongest homotypical π-π interaction, enabling us to modulate the structure of condensates from core-shell to homogeneous by altering the amino acid composition. Molecular dynamics simulation combined with cryogenic focused ion beam scanning electron microscopy and cryogenic electron microscopy show that the inner core of multiphasic tetrapeptide condensates is solid-like, consisting of ordered structures. The core is enveloped by a liquid-like shell, stabilizing the core structure. Furthermore, we demonstrate control over multiphasic condensate formation through intrinsic redox reactions or post-translational modifications, facilitating the rational design of synthetic multiphasic condensates for various applications on demand.

Date: 2025
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DOI: 10.1038/s41467-025-58060-6

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