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Uncovering minimal pathways in melanoma initiation

Hui Xiao, Jessica Shiu, Chi-Fen Chen, Jie Wu, Peijie Zhou, Sahil S. Telang, Rolando Ruiz-Vega, Robert A. Edwards, Qing Nie, Arthur D. Lander and Anand K. Ganesan ()
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Hui Xiao: University of California
Jessica Shiu: University of California
Chi-Fen Chen: University of California
Jie Wu: University of California
Peijie Zhou: University of California
Sahil S. Telang: University of California
Rolando Ruiz-Vega: University of California
Robert A. Edwards: University of California
Qing Nie: University of California
Arthur D. Lander: University of California
Anand K. Ganesan: University of California

Nature Communications, 2025, vol. 16, issue 1, 1-17

Abstract: Abstract Melanomas are genetically heterogeneous, displaying mitogen-activated protein kinase mutations and homozygous loss of tumor suppressor genes. Mouse models combining such mutations produce fast-growing tumors. In contrast, rare, slow-growing tumors arise in mice combining Braf activation with heterozygous loss of Pten. Here we show that similar tumors can arise in albino mice bearing only a Braf mutation. Incidence kinetics suggest a stochastic event underlies tumorigenesis in tumors that arise with only a Braf mutation, yet de novo mutations or structural variants that could explain the incidence of most tumors could not be found. Single-cell transcriptomics of tumors identify a cell type resembling “neural crest-like” cells in human and mouse melanomas. These exist in normal mouse skin, expand upon Braf activation, and persist through serial transplantation; analyses of gene expression suggest they serve as precursors of malignant cells. This state may serve as an intermediate on a slow path to malignancy that may provide a diagnostically and therapeutically important source of cellular heterogeneity.

Date: 2025
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DOI: 10.1038/s41467-025-60742-0

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