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Novel sialic acid derivatives lock open the 150-loop of an influenza A virus group-1 sialidase

Santosh Rudrawar, Jeffrey C. Dyason, Marie-Anne Rameix-Welti, Faith J. Rose, Philip S. Kerry, Rupert J. M. Russell, Sylvie van der Werf, Robin J. Thomson, Nadia Naffakh and Mark von Itzstein ()
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Santosh Rudrawar: Institute for Glycomics, Gold Coast Campus, Griffith University
Jeffrey C. Dyason: Institute for Glycomics, Gold Coast Campus, Griffith University
Marie-Anne Rameix-Welti: Institut Pasteur, Unité de Génétique Moléculaire des Virus à ARN
Faith J. Rose: Institute for Glycomics, Gold Coast Campus, Griffith University
Philip S. Kerry: Interdisciplinary Centre for Human and Avian Influenza Research, University of St Andrews
Rupert J. M. Russell: Interdisciplinary Centre for Human and Avian Influenza Research, University of St Andrews
Sylvie van der Werf: Institut Pasteur, Unité de Génétique Moléculaire des Virus à ARN
Robin J. Thomson: Institute for Glycomics, Gold Coast Campus, Griffith University
Nadia Naffakh: Institut Pasteur, Unité de Génétique Moléculaire des Virus à ARN
Mark von Itzstein: Institute for Glycomics, Gold Coast Campus, Griffith University

Nature Communications, 2010, vol. 1, issue 1, 1-7

Abstract: Abstract Influenza virus sialidase has an essential role in the virus' life cycle. Two distinct groups of influenza A virus sialidases have been established, that differ in the flexibility of the '150-loop', providing a more open active site in the apo form of the group-1 compared to group-2 enzymes. In this study we show, through a multidisciplinary approach, that novel sialic acid-based derivatives can exploit this structural difference and selectively inhibit the activity of group-1 sialidases. We also demonstrate that group-1 sialidases from drug-resistant mutant influenza viruses are sensitive to these designed compounds. Moreover, we have determined, by protein X-ray crystallography, that these inhibitors lock open the group-1 sialidase flexible 150-loop, in agreement with our molecular modelling prediction. This is the first direct proof that compounds may be developed to selectively target the pandemic A/H1N1, avian A/H5N1 and other group-1 sialidase-containing viruses, based on an open 150-loop conformation of the enzyme.

Date: 2010
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DOI: 10.1038/ncomms1114

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