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Biosynthesis of ilamycins featuring unusual building blocks and engineered production of enhanced anti-tuberculosis agents

Junying Ma (), Hongbo Huang, Yunchang Xie, Zhiyong Liu, Jin Zhao, Chunyan Zhang, Yanxi Jia, Yun Zhang, Hua Zhang, Tianyu Zhang and Jianhua Ju ()
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Junying Ma: South China Sea Institute of Oceanology, Chinese Academy of Sciences
Hongbo Huang: South China Sea Institute of Oceanology, Chinese Academy of Sciences
Yunchang Xie: South China Sea Institute of Oceanology, Chinese Academy of Sciences
Zhiyong Liu: Chinese Academy of Sciences
Jin Zhao: Institute of Laboratory Medicine, Guangdong Medical University
Chunyan Zhang: South China Sea Institute of Oceanology, Chinese Academy of Sciences
Yanxi Jia: South China Sea Institute of Oceanology, Chinese Academy of Sciences
Yun Zhang: South China Sea Institute of Oceanology, Chinese Academy of Sciences
Hua Zhang: Institute of Laboratory Medicine, Guangdong Medical University
Tianyu Zhang: Chinese Academy of Sciences
Jianhua Ju: South China Sea Institute of Oceanology, Chinese Academy of Sciences

Nature Communications, 2017, vol. 8, issue 1, 1-10

Abstract: Abstract Tuberculosis remains one of the world’s deadliest communicable diseases, novel anti-tuberculosis agents are urgently needed due to severe drug resistance and the co-epidemic of tuberculosis/human immunodeficiency virus. Here, we show the isolation of six anti-mycobacterial ilamycin congeners (1–6) bearing rare L-3-nitro-tyrosine and L-2-amino-4-hexenoic acid structural units from the deep sea-derived Streptomyces atratus SCSIO ZH16. The biosynthesis of the rare L-3-nitrotyrosine and L-2-amino-4-hexenoic acid units as well as three pre-tailoring and two post-tailoring steps are probed in the ilamycin biosynthetic machinery through a series of gene inactivation, precursor chemical complementation, isotope-labeled precursor feeding experiments, as well as structural elucidation of three intermediates (6–8) from the respective mutants. Most impressively, ilamycins E1/E2, which are produced in high titers by a genetically engineered mutant strain, show very potent anti-tuberculosis activity with an minimum inhibitory concentration value ≈9.8 nM to Mycobacterium tuberculosis H37Rv constituting extremely potent and exciting anti-tuberculosis drug leads.

Date: 2017
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DOI: 10.1038/s41467-017-00419-5

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