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Homo-PROTACs: bivalent small-molecule dimerizers of the VHL E3 ubiquitin ligase to induce self-degradation

Chiara Maniaci, Scott J. Hughes, Andrea Testa, Wenzhang Chen, Douglas J. Lamont, Sonia Rocha, Dario R. Alessi, Roberto Romeo and Alessio Ciulli ()
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Chiara Maniaci: University of Dundee
Scott J. Hughes: University of Dundee
Andrea Testa: University of Dundee
Wenzhang Chen: University of Dundee
Douglas J. Lamont: University of Dundee
Sonia Rocha: University of Dundee
Dario R. Alessi: University of Dundee
Roberto Romeo: University of Messina, Polo Universitario Viale SS. Annunziata SNC
Alessio Ciulli: University of Dundee

Nature Communications, 2017, vol. 8, issue 1, 1-14

Abstract: Abstract E3 ubiquitin ligases are key enzymes within the ubiquitin proteasome system which catalyze the ubiquitination of proteins, targeting them for proteasomal degradation. E3 ligases are gaining importance as targets to small molecules, both for direct inhibition and to be hijacked to induce the degradation of non-native neo-substrates using bivalent compounds known as PROTACs (for ‘proteolysis-targeting chimeras’). We describe Homo-PROTACs as an approach to dimerize an E3 ligase to trigger its suicide-type chemical knockdown inside cells. We provide proof-of-concept of Homo-PROTACs using diverse molecules composed of two instances of a ligand for the von Hippel-Lindau (VHL) E3 ligase. The most active compound, CM11, dimerizes VHL with high avidity in vitro and induces potent, rapid and proteasome-dependent self-degradation of VHL in different cell lines, in a highly isoform-selective fashion and without triggering a hypoxic response. This approach offers a novel chemical probe for selective VHL knockdown, and demonstrates the potential for a new modality of chemical intervention on E3 ligases.

Date: 2017
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DOI: 10.1038/s41467-017-00954-1

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