Learning from the past: A short term forecast method for the COVID-19 incidence curve

Jean-David Morel, Jean-Michel Morel and Luis Alvarez

PLOS Computational Biology, 2023, vol. 19, issue 6, 1-20

Abstract: The COVID-19 pandemy has created a radically new situation where most countries provide raw measurements of their daily incidence and disclose them in real time. This enables new machine learning forecast strategies where the prediction might no longer be based just on the past values of the current incidence curve, but could take advantage of observations in many countries. We present such a simple global machine learning procedure using all past daily incidence trend curves. Each of the 27,418 COVID-19 incidence trend curves in our database contains the values of 56 consecutive days extracted from observed incidence curves across 61 world regions and countries. Given a current incidence trend curve observed over the past four weeks, its forecast in the next four weeks is computed by matching it with the first four weeks of all samples, and ranking them by their similarity to the query curve. Then the 28 days forecast is obtained by a statistical estimation combining the values of the 28 last observed days in those similar samples. Using comparison performed by the European Covid-19 Forecast Hub with the current state of the art forecast methods, we verify that the proposed global learning method, EpiLearn, compares favorably to methods forecasting from a single past curve.Author summary: Forecasting the short time evolution of the COVID-19 daily incidence is a key issue in the epidemic decision making policy. We propose a machine learning method which forecasts the future values of the daily incidence trend based on the evolution of other incidence trend curves that were similar to the current one in the past. Using comparison performed by the European Covid-19 Forecast Hub with the current state of the art forecast methods, we verify that the proposed global learning method, EpiLearn compares favorably to methods that forecast from a single past curve.

Date: 2023
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Persistent link: https://EconPapers.repec.org/RePEc:plo:pcbi00:1010790

DOI: 10.1371/journal.pcbi.1010790

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