Automated discovery of experimental designs in super-resolution microscopy with XLuminA

Carla Rodríguez (), Sören Arlt, Leonhard Möckl () and Mario Krenn ()
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Carla Rodríguez: Max Planck Institute for the Science of Light
Sören Arlt: Max Planck Institute for the Science of Light
Leonhard Möckl: Max Planck Institute for the Science of Light
Mario Krenn: Max Planck Institute for the Science of Light

Nature Communications, 2024, vol. 15, issue 1, 1-14

Abstract: Abstract Driven by human ingenuity and creativity, the discovery of super-resolution techniques, which circumvent the classical diffraction limit of light, represent a leap in optical microscopy. However, the vast space encompassing all possible experimental configurations suggests that some powerful concepts and techniques might have not been discovered yet, and might never be with a human-driven direct design approach. Thus, AI-based exploration techniques could provide enormous benefit, by exploring this space in a fast, unbiased way. We introduce XLuminA, an open-source computational framework developed using JAX, a high-performance computing library in Python. XLuminA offers enhanced computational speed enabled by JAX’s accelerated linear algebra compiler (XLA), just-in-time compilation, and its seamlessly integrated automatic vectorization, automatic differentiation capabilities and GPU compatibility. XLuminA demonstrates a speed-up of 4 orders of magnitude compared to well-established numerical optimization methods. We showcase XLuminA’s potential by re-discovering three foundational experiments in advanced microscopy, and identifying an unseen experimental blueprint featuring sub-diffraction imaging capabilities. This work constitutes an important step in AI-driven scientific discovery of new concepts in optics and advanced microscopy.

Date: 2024
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DOI: 10.1038/s41467-024-54696-y

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