Modification of the terminal restriction fragment length polymorphism analysisfor assessment of a specific taxonomic group within a soil microbial community

J. Kopecký, G. Novotná and M. Ságová-Marečková
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J. Kopecký: Crop Research Institute, Prague, Czech Republic
G. Novotná: Crop Research Institute, Prague, Czech Republic
M. Ságová-Marečková: Crop Research Institute, Prague, Czech Republic

Plant, Soil and Environment, 2009, vol. 55, issue 9, 397-403

Abstract: A double color terminal restriction fragment length polymorphism analysis was applied for the diversity assessment of a complex bacterial community in a deciduous forest soil. Application of the second label was used to project a specific taxonomic group of bacteria, actinomycetes in our case, to the universal fingerprint. The diversity of actinomycetes was evaluated directly as a percentage of the whole bacterial community by comparing the corresponding terminal fragments of the same length.

Keywords: bacterial community; Actinobacteria; terminal restriction fragment length polymorphism (search for similar items in EconPapers)
Date: 2009
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Persistent link: https://EconPapers.repec.org/RePEc:caa:jnlpse:v:55:y:2009:i:9:id:1012-pse

DOI: 10.17221/1012-PSE

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