Chiral twisting in a bacterial cytoskeletal polymer affects filament size and orientation

Handuo Shi, David A. Quint, Gregory M. Grason, Ajay Gopinathan and Kerwyn Casey Huang ()
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Handuo Shi: Stanford University
David A. Quint: Stanford University
Gregory M. Grason: University of Massachusetts
Ajay Gopinathan: University of California at Merced
Kerwyn Casey Huang: Stanford University

Nature Communications, 2020, vol. 11, issue 1, 1-12

Abstract: Abstract In many rod-shaped bacteria, the actin homolog MreB directs cell-wall insertion and maintains cell shape, but it remains unclear how structural changes to MreB affect its organization in vivo. Here, we perform molecular dynamics simulations for Caulobacter crescentus MreB to extract mechanical parameters for inputs into a coarse-grained biophysical polymer model that successfully predicts MreB filament properties in vivo. Our analyses indicate that MreB double protofilaments can exhibit left-handed twisting that is dependent on the bound nucleotide and membrane binding; the degree of twisting correlates with the length and orientation of MreB filaments observed in vitro and in vivo. Our molecular dynamics simulations also suggest that membrane binding of MreB double protofilaments induces a stable membrane curvature of similar magnitude to that observed in vivo. Thus, our multiscale modeling correlates cytoskeletal filament size with conformational changes inferred from molecular dynamics simulations, providing a paradigm for connecting protein filament structure and mechanics to cellular organization and function.

Date: 2020
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DOI: 10.1038/s41467-020-14752-9

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