ZI-Closure Scheme: A Method to Solve and Study Stochastic Reaction Networks

M. Vlysidis, P. H. Constantino and Y. N. Kaznessis ()
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M. Vlysidis: University of Minnesota, Department of Chemical Engineering and Materials Science
P. H. Constantino: University of Minnesota, Department of Chemical Engineering and Materials Science
Y. N. Kaznessis: University of Minnesota, Department of Chemical Engineering and Materials Science

A chapter in Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology, 2017, pp 159-174 from Springer

Abstract: Abstract We use an example to present in exhaustive detail the algorithmic steps of the zero-information (ZI) closure scheme (Smadbeck and Kaznessis, Proc Natl Acad Sci USA 110:14261–14265, 2013). ZI-closure is a method for solving the chemical master equation (CME) of stochastic chemical reaction networks.

Keywords: Stochastic Reaction Networks; Chemical Master Equation (CME); Moment Equations; Lower Order Moments; Stochastic Simulation Algorithm (SSA) (search for similar items in EconPapers)
Date: 2017
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Persistent link: https://EconPapers.repec.org/RePEc:spr:sprchp:978-3-319-62627-7_8

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DOI: 10.1007/978-3-319-62627-7_8

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