Calibration Spiking of MIR-DRIFTS Soil Spectra for Carbon Predictions Using PLSR Extensions and Log-Ratio Transformations

Wiktor R. Żelazny and Tomáš Šimon
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Wiktor R. Żelazny: Division of Crop Management Systems, Crop Research Institute, Drnovská 507/73, CZ161 06 Praha, Czech Republic
Tomáš Šimon: Division of Crop Management Systems, Crop Research Institute, Drnovská 507/73, CZ161 06 Praha, Czech Republic

Agriculture, 2022, vol. 12, issue 5, 1-26

Abstract: There is a need to minimize the usage of traditional laboratory reference methods in favor of spectroscopy for routine soil carbon monitoring, with potential cost savings existing especially for labile pools. Mid-infrared spectroscopy has been associated with accurate soil carbon predictions, but the method has not been researched extensively in connection to C lability. More studies are also needed on reducing the numbers of samples and on how to account for the compositional nature of C pools. This study compares performance of two classes of partial least squares regression models to predict soil carbon in a global (models trained to data from a spectral library), local (models trained to data from a target area), and calibration-spiking (spectral library augmented with target-area spectra) scheme. Topsoil samples were+ scanned with a Fourier-transform infrared spectrometer, total and hot-water extractable carbon determined, and isometric log-ratio coordinates derived from the latter measurements. The best RMSEP was estimated as 0.38 and 0.23 percentage points TC for the district and field scale, respectively—values sufficiently low to make only qualitative predictions according to the RPD and RPIQ criteria. Models estimating soil carbon lability performed unsatisfactorily, presumably due to low labile pool concentration. Traditional weighing of spiking samples by including multiple copies thereof in training data yielded better results than canonical partial least squares regression modeling with embedded weighing. Although local modeling was associated with the most accurate predictions, calibration spiking addressed better the trade-off between data acquisition costs and model quality. Calibration spiking with compositional data analysis is, therefore, recommended for routine monitoring.

Keywords: soil organic matter; MIR-DRIFTS; chemometrics; compositional data analysis; reproducibility (search for similar items in EconPapers)
JEL-codes: Q1 Q10 Q11 Q12 Q13 Q14 Q15 Q16 Q17 Q18 (search for similar items in EconPapers)
Date: 2022
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