The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

Martin, F.; Aerts, A.; Ahrén, D.; Brun, A.; Danchin, E. G. J.; Duchaussoy, F.; Gibon, J.; Kohler, A.; Lindquist, E.; Pereda, V.; Salamov, A.; Shapiro, H. J.; Wuyts, J.; Blaudez, D.; Buée, M.; Brokstein, P.; Canbäck, B.; Cohen, D.; Courty, P. E.; Coutinho, P. M.; Delaruelle, C.; Detter, J. C.; Deveau, A.; DiFazio, S.; Duplessis, S.; Fraissinet-Tachet, L.; Lucic, E.; Frey-Klett, P.; Fourrey, C.; Feussner, I.; Gay, G.; Grimwood, J.; Hoegger, P. J.; Jain, P.; Kilaru, S.; Labbé, J.; Lin, Y. C.; Legué, V.; Tacon, F. Le; Marmeisse, R.; Melayah, D.; Montanini, B.; Muratet, M.; Nehls, U.; Niculita-Hirzel, H.; Secq, M. P. Oudot-Le; Peter, M.; Quesneville, H.; Rajashekar, B.; Reich, M.; Rouhier, N.; Schmutz, J.; Yin, T.; Chalot, M.; Henrissat, B.; Kües, U.; Lucas, S.; Van de Peer, Y.; Podila, G. K.; Polle, A.; Pukkila, P. J.; Richardson, P. M.; Rouzé, P.; Sanders, I. R.; Stajich, J. E.; Tunlid, A.; Tuskan, G.; Grigoriev, I. V.

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

F. Martin (), A. Aerts, D. Ahrén, A. Brun, E. G. J. Danchin, F. Duchaussoy, J. Gibon, A. Kohler, E. Lindquist, V. Pereda, A. Salamov, H. J. Shapiro, J. Wuyts, D. Blaudez, M. Buée, P. Brokstein, B. Canbäck, D. Cohen, P. E. Courty, P. M. Coutinho, C. Delaruelle, J. C. Detter, A. Deveau, S. DiFazio, S. Duplessis, L. Fraissinet-Tachet, E. Lucic, P. Frey-Klett, C. Fourrey, I. Feussner, G. Gay, J. Grimwood, P. J. Hoegger, P. Jain, S. Kilaru, J. Labbé, Y. C. Lin, V. Legué, F. Le Tacon, R. Marmeisse, D. Melayah, B. Montanini, M. Muratet, U. Nehls, H. Niculita-Hirzel, M. P. Oudot-Le Secq, M. Peter, H. Quesneville, B. Rajashekar, M. Reich, N. Rouhier, J. Schmutz, T. Yin, M. Chalot, B. Henrissat, U. Kües, S. Lucas, Y. Van de Peer, G. K. Podila, A. Polle, P. J. Pukkila, P. M. Richardson, P. Rouzé, I. R. Sanders, J. E. Stajich, A. Tunlid, G. Tuskan and I. V. Grigoriev
Additional contact information
F. Martin: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
A. Aerts: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
D. Ahrén: Microbial Ecology, Lund University
A. Brun: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
E. G. J. Danchin: Architecture et Fonction des Macromolécules Biologiques, UMR 6098 CNRS-Universités Aix-Marseille I & II, 13288 Marseille Cedex 9, France
F. Duchaussoy: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
J. Gibon: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
A. Kohler: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
E. Lindquist: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
V. Pereda: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
A. Salamov: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
H. J. Shapiro: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
J. Wuyts: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
D. Blaudez: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
M. Buée: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
P. Brokstein: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
B. Canbäck: Microbial Ecology, Lund University
D. Cohen: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
P. E. Courty: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
P. M. Coutinho: Architecture et Fonction des Macromolécules Biologiques, UMR 6098 CNRS-Universités Aix-Marseille I & II, 13288 Marseille Cedex 9, France
C. Delaruelle: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
J. C. Detter: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
A. Deveau: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
S. DiFazio: West Virginia University, Morgantown, West Virginia 26506, USA
S. Duplessis: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
L. Fraissinet-Tachet: Université Lyon 1, UMR CNRS - USC INRA d’Ecologie Microbienne, 69622 Villeurbanne, France
E. Lucic: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
P. Frey-Klett: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
C. Fourrey: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
I. Feussner: Georg-August-Universität Göttingen
G. Gay: Université Lyon 1, UMR CNRS - USC INRA d’Ecologie Microbienne, 69622 Villeurbanne, France
J. Grimwood: Stanford Human Genome Center, Stanford University School of Medicine, 975 California Avenue, Palo Alto, California 94304, USA
P. J. Hoegger: Institute of Forest Botany, Georg-August-Universität, 37077 Göttingen, Germany
P. Jain: University of Alabama, Huntsville, Alabama 35899, USA
S. Kilaru: Institute of Forest Botany, Georg-August-Universität, 37077 Göttingen, Germany
J. Labbé: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
Y. C. Lin: Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University
V. Legué: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
F. Le Tacon: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
R. Marmeisse: Université Lyon 1, UMR CNRS - USC INRA d’Ecologie Microbienne, 69622 Villeurbanne, France
D. Melayah: Université Lyon 1, UMR CNRS - USC INRA d’Ecologie Microbienne, 69622 Villeurbanne, France
B. Montanini: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
M. Muratet: University of Alabama, Huntsville, Alabama 35899, USA
U. Nehls: Eberhard-Karls-Universität, Physiologische Oekologie der Pflanzen, 72076 Tübingen, Germany
H. Niculita-Hirzel: University of Lausanne
M. P. Oudot-Le Secq: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
M. Peter: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
H. Quesneville: Unité de Recherches en Génomique-Info, INRA-Evry, 91034 Évry Cedex, France
B. Rajashekar: Microbial Ecology, Lund University
M. Reich: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
N. Rouhier: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
J. Schmutz: Stanford Human Genome Center, Stanford University School of Medicine, 975 California Avenue, Palo Alto, California 94304, USA
T. Yin: Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
M. Chalot: UMR 1136, INRA-Nancy Université, Interactions Arbres/Microorganismes, INRA-Nancy, 54280 Champenoux, France
B. Henrissat: Architecture et Fonction des Macromolécules Biologiques, UMR 6098 CNRS-Universités Aix-Marseille I & II, 13288 Marseille Cedex 9, France
U. Kües: Institute of Forest Botany, Georg-August-Universität, 37077 Göttingen, Germany
S. Lucas: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
Y. Van de Peer: Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University
G. K. Podila: University of Alabama, Huntsville, Alabama 35899, USA
A. Polle: Institute of Forest Botany, Georg-August-Universität, 37077 Göttingen, Germany
P. J. Pukkila: The University of North Carolina, Chapel Hill, North Carolina 27599-3280, USA
P. M. Richardson: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA
P. Rouzé: Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University
I. R. Sanders: University of Lausanne
J. E. Stajich: University of California, Berkeley, California 94720-3102, USA
A. Tunlid: Microbial Ecology, Lund University
G. Tuskan: Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
I. V. Grigoriev: US DOE Joint Genome Institute, Walnut Creek, California 94598, USA

Nature, 2008, vol. 452, issue 7183, 88-92

Abstract: A symbiont genome The fungus Laccaria bicolor — seen in its above-ground fruiting body presence as the 'bicoloured deceiver' mushroom — lives symbiotically on the roots of trees. Its genome has now been sequenced, and the key features of the genome characterized by transcript profiling. The study throws light on the mechanism of mycorrhizal symbiosis, the union of roots and soil fungi that is of vital important to plant productivity. And it will be of keen interest to evolutionary and plant biologists for its revelations about plant–fungus interactions shaping genomes over time.

Date: 2008
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DOI: 10.1038/nature06556

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