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G domain dimerization controls dynamin's assembly-stimulated GTPase activity

Joshua S. Chappie, Sharmistha Acharya, Marilyn Leonard, Sandra L. Schmid () and Fred Dyda ()
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Joshua S. Chappie: Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, Maryland 20892, USA
Sharmistha Acharya: The Scripps Research Institute, La Jolla, California 92037, USA
Marilyn Leonard: The Scripps Research Institute, La Jolla, California 92037, USA
Sandra L. Schmid: The Scripps Research Institute, La Jolla, California 92037, USA
Fred Dyda: Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, Maryland 20892, USA

Nature, 2010, vol. 465, issue 7297, 435-440

Abstract: Abstract Dynamin is an atypical GTPase that catalyses membrane fission during clathrin-mediated endocytosis. The mechanisms of dynamin’s basal and assembly-stimulated GTP hydrolysis are unknown, though both are indirectly influenced by the GTPase effector domain (GED). Here we present the 2.0 Å resolution crystal structure of a human dynamin 1-derived minimal GTPase–GED fusion protein, which was dimeric in the presence of the transition state mimic GDP.AlF4-.The structure reveals dynamin’s catalytic machinery and explains how assembly-stimulated GTP hydrolysis is achieved through G domain dimerization. A sodium ion present in the active site suggests that dynamin uses a cation to compensate for the developing negative charge in the transition state in the absence of an arginine finger. Structural comparison to the rat dynamin G domain reveals key conformational changes that promote G domain dimerization and stimulated hydrolysis. The structure of the GTPase–GED fusion protein dimer provides insight into the mechanisms underlying dynamin-catalysed membrane fission.

Date: 2010
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DOI: 10.1038/nature09032

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