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Charting a dynamic DNA methylation landscape of the human genome

Michael J. Ziller, Hongcang Gu, Fabian Müller, Julie Donaghey, Linus T.-Y. Tsai, Oliver Kohlbacher, Philip L. De Jager, Evan D. Rosen, David A. Bennett, Bradley E. Bernstein, Andreas Gnirke and Alexander Meissner ()
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Michael J. Ziller: Broad Institute of MIT and Harvard
Hongcang Gu: Broad Institute of MIT and Harvard
Fabian Müller: Harvard University
Julie Donaghey: Broad Institute of MIT and Harvard
Linus T.-Y. Tsai: Beth Israel Deaconess Medical Center
Oliver Kohlbacher: Applied Bioinformatics, Center for Bioinformatics and Quantitative Biology Center, University of Tübingen, 72074 Tübingen, Germany
Philip L. De Jager: Broad Institute of MIT and Harvard
Evan D. Rosen: Broad Institute of MIT and Harvard
David A. Bennett: Rush Alzheimer’s Disease Center, Rush University Medical Center, 600 South Paulina Street, Chicago, Illinois 60612, USA
Bradley E. Bernstein: Broad Institute of MIT and Harvard
Andreas Gnirke: Broad Institute of MIT and Harvard
Alexander Meissner: Broad Institute of MIT and Harvard

Nature, 2013, vol. 500, issue 7463, 477-481

Abstract: Whole-genome bisulphite sequencing data from diverse human cell and tissue types shows that only about 22% of CpGs change their methylation state across these cell types; most of these CpGs are located at gene regulatory elements, particularly enhancers and transcription-factor-binding sites, and these selected regions with dynamic DNA methylation patterns could help to define putative regulatory elements further.

Date: 2013
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DOI: 10.1038/nature12433

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