Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes

Jenni Hultman, Mark P. Waldrop, Rachel Mackelprang, Maude M. David, Jack McFarland, Steven J. Blazewicz, Jennifer Harden, Merritt R. Turetsky, A. David McGuire, Manesh B. Shah, Nathan C. VerBerkmoes, Lang Ho Lee, Kostas Mavrommatis and Janet K. Jansson ()
Additional contact information
Jenni Hultman: Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California, 94720, USA
Mark P. Waldrop: US Geological Survey, 345 Middlefield Road
Rachel Mackelprang: 18111 Nordhoff Street, California State University Northridge
Maude M. David: Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California, 94720, USA
Jack McFarland: US Geological Survey, 345 Middlefield Road
Steven J. Blazewicz: US Geological Survey, 345 Middlefield Road
Jennifer Harden: US Geological Survey, 345 Middlefield Road
Merritt R. Turetsky: 50 Stone Road East, University of Guelph, Guelph, Ontario N1G 2W1, Canada
A. David McGuire: US Geological Survey, Alaska Cooperative Fish and Wildlife Research Unit, 211A Irving I Building, University of Alaska Fairbanks
Manesh B. Shah: One Bethel Valley Road, Building 1059, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6420, USA
Nathan C. VerBerkmoes: One Bethel Valley Road, Building 1059, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6420, USA
Lang Ho Lee: Graduate School of Genome Science and Technology, University of Tennessee and Oak Ridge National Laboratory, 2510 River Drive, Knoxville, Tennessee 37996, USA
Kostas Mavrommatis: 2800 Mitchell Drive
Janet K. Jansson: Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California, 94720, USA

Nature, 2015, vol. 521, issue 7551, 208-212

Abstract: A multi-omics approach, integrating metagenomics, metatranscriptomics and metaproteomics, determines the phylogenetic composition of the microbial community and assesses its functional potential and activity along a thaw transition from intact permafrost to thermokast bog.

Date: 2015
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DOI: 10.1038/nature14238

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