Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus

Thomas Mock (), Robert P. Otillar, Jan Strauss, Mark McMullan, Pirita Paajanen, Jeremy Schmutz, Asaf Salamov, Remo Sanges, Andrew Toseland, Ben J. Ward, Andrew E. Allen, Christopher L. Dupont, Stephan Frickenhaus, Florian Maumus, Alaguraj Veluchamy, Taoyang Wu, Kerrie W. Barry, Angela Falciatore, Maria I. Ferrante, Antonio E. Fortunato, Gernot Glöckner, Ansgar Gruber, Rachel Hipkin, Michael G. Janech, Peter G. Kroth, Florian Leese, Erika A. Lindquist, Barbara R. Lyon, Joel Martin, Christoph Mayer, Micaela Parker, Hadi Quesneville, James A. Raymond, Christiane Uhlig, Ruben E. Valas, Klaus U. Valentin, Alexandra Z. Worden, E. Virginia Armbrust, Matthew D. Clark, Chris Bowler, Beverley R. Green, Vincent Moulton, Cock van Oosterhout and Igor V. Grigoriev
Additional contact information
Thomas Mock: School of Environmental Sciences, University of East Anglia
Robert P. Otillar: Department of Energy Joint Genome Institute
Jan Strauss: School of Environmental Sciences, University of East Anglia
Mark McMullan: Earlham Institute, Norwich Research Park
Pirita Paajanen: Earlham Institute, Norwich Research Park
Jeremy Schmutz: Department of Energy Joint Genome Institute
Asaf Salamov: Department of Energy Joint Genome Institute
Remo Sanges: Biology and Evolution of Marine Organisms, Computational Genomics, Stazione Zoologica Anton Dohrn
Andrew Toseland: School of Computing Sciences, University of East Anglia
Ben J. Ward: School of Environmental Sciences, University of East Anglia
Andrew E. Allen: Microbial and Environmental Genomics, J. Craig Venter Institute
Christopher L. Dupont: Microbial and Environmental Genomics, J. Craig Venter Institute
Stephan Frickenhaus: Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- and Meeresforschung, Am Handelshafen 12
Florian Maumus: URGI, INRA, Université Paris-Saclay
Alaguraj Veluchamy: Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
Taoyang Wu: School of Computing Sciences, University of East Anglia
Kerrie W. Barry: Department of Energy Joint Genome Institute
Angela Falciatore: Sorbonne Universités, UPMC, Institut de Biologie Paris-Seine, CNRS, Laboratoire de Biologie Computationnelle et Quantitative UMR 7238
Maria I. Ferrante: Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Villa Comunale
Antonio E. Fortunato: Sorbonne Universités, UPMC, Institut de Biologie Paris-Seine, CNRS, Laboratoire de Biologie Computationnelle et Quantitative UMR 7238
Gernot Glöckner: Institute for Biochemistry I, Medical Faculty, University of Cologne
Ansgar Gruber: Fachbereich Biologie, Universität Konstanz
Rachel Hipkin: School of Environmental Sciences, University of East Anglia
Michael G. Janech: Medical University of South Carolina, Charleston
Peter G. Kroth: Fachbereich Biologie, Universität Konstanz
Florian Leese: University of Duisburg-Essen, Faculty of Biology, Aquatic Ecosystem Research Universitaetsstrasse 5
Erika A. Lindquist: Department of Energy Joint Genome Institute
Barbara R. Lyon: Marine Biomedicine and Environmental Sciences Center, Medical University of South Carolina, Charleston
Joel Martin: Department of Energy Joint Genome Institute
Christoph Mayer: Zoologisches Forschungsmuseum Alexander Koenig, Leibniz Institut für Biodiversität der Tiere, Adenauerallee 160
Micaela Parker: School of Oceanography, Center for Environmental Genomics, University of Washington
Hadi Quesneville: URGI, INRA, Université Paris-Saclay
James A. Raymond: School of Life Sciences, University of Nevada
Christiane Uhlig: Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- and Meeresforschung, Am Handelshafen 12
Ruben E. Valas: Microbial and Environmental Genomics, J. Craig Venter Institute
Klaus U. Valentin: Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- and Meeresforschung, Am Handelshafen 12
Alexandra Z. Worden: Monterey Bay Aquarium Research Institute, 7700 Sandholdt Road
E. Virginia Armbrust: School of Oceanography, Center for Environmental Genomics, University of Washington
Matthew D. Clark: School of Environmental Sciences, University of East Anglia
Chris Bowler: Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
Beverley R. Green: University of British Columbia, 3529-6270 University Boulevard, Vancouver
Vincent Moulton: School of Computing Sciences, University of East Anglia
Cock van Oosterhout: School of Environmental Sciences, University of East Anglia
Igor V. Grigoriev: Department of Energy Joint Genome Institute

Nature, 2017, vol. 541, issue 7638, 536-540

Abstract: The genome of the Southern Ocean phytoplankton Fragilariopsis cylindrus differs markedly from the genomes of its more temperate relatives, with divergent alleles being differentially expressed in environmentally specific conditions such as freezing and darkness.

Date: 2017
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DOI: 10.1038/nature20803

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