Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

Lasse Maretty, Jacob Malte Jensen, Bent Petersen, Jonas Andreas Sibbesen, Siyang Liu, Palle Villesen, Laurits Skov, Kirstine Belling, Christian Theil Have, Jose M. G. Izarzugaza, Marie Grosjean, Jette Bork-Jensen, Jakob Grove, Thomas D. Als, Shujia Huang, Yuqi Chang, Ruiqi Xu, Weijian Ye, Junhua Rao, Xiaosen Guo, Jihua Sun, Hongzhi Cao, Chen Ye, Johan van Beusekom, Thomas Espeseth, Esben Flindt, Rune M. Friborg, Anders E. Halager, Stephanie Le Hellard, Christina M. Hultman, Francesco Lescai, Shengting Li, Ole Lund, Peter Løngren, Thomas Mailund, Maria Luisa Matey-Hernandez, Ole Mors, Christian N. S. Pedersen, Thomas Sicheritz-Pontén, Patrick Sullivan, Ali Syed, David Westergaard, Rachita Yadav, Ning Li, Xun Xu, Torben Hansen, Anders Krogh, Lars Bolund, Thorkild I. A. Sørensen, Oluf Pedersen, Ramneek Gupta, Simon Rasmussen, Søren Besenbacher, Anders D. Børglum, Jun Wang, Hans Eiberg, Karsten Kristiansen (), Søren Brunak () and Mikkel Heide Schierup ()
Additional contact information
Lasse Maretty: Bioinformatics Centre, University of Copenhagen
Jacob Malte Jensen: Bioinformatics Research Centre, Aarhus University
Bent Petersen: DTU Bioinformatics, Technical University of Denmark
Jonas Andreas Sibbesen: Bioinformatics Centre, University of Copenhagen
Siyang Liu: Bioinformatics Centre, University of Copenhagen
Palle Villesen: Bioinformatics Research Centre, Aarhus University
Laurits Skov: Bioinformatics Research Centre, Aarhus University
Kirstine Belling: DTU Bioinformatics, Technical University of Denmark
Christian Theil Have: Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen
Jose M. G. Izarzugaza: DTU Bioinformatics, Technical University of Denmark
Marie Grosjean: DTU Bioinformatics, Technical University of Denmark
Jette Bork-Jensen: Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen
Jakob Grove: iSEQ, Centre for Integrative Sequencing, Aarhus University
Thomas D. Als: iSEQ, Centre for Integrative Sequencing, Aarhus University
Shujia Huang: BGI-Shenzhen
Yuqi Chang: BGI-Shenzhen
Ruiqi Xu: BGI-Europe
Weijian Ye: BGI-Europe
Junhua Rao: BGI-Europe
Xiaosen Guo: BGI-Shenzhen
Jihua Sun: BGI-Europe
Hongzhi Cao: BGI-Shenzhen
Chen Ye: BGI-Shenzhen
Johan van Beusekom: DTU Bioinformatics, Technical University of Denmark
Thomas Espeseth: University of Oslo
Esben Flindt: Laboratory of Genomics and Molecular Biomedicine, University of Copenhagen
Rune M. Friborg: Bioinformatics Research Centre, Aarhus University
Anders E. Halager: Bioinformatics Research Centre, Aarhus University
Stephanie Le Hellard: NORMENT, KG Jebsen Centre for Psychosis Research, University of Bergen
Christina M. Hultman: Karolinska Institutet
Francesco Lescai: iSEQ, Centre for Integrative Sequencing, Aarhus University
Shengting Li: iSEQ, Centre for Integrative Sequencing, Aarhus University
Ole Lund: DTU Bioinformatics, Technical University of Denmark
Peter Løngren: DTU Bioinformatics, Technical University of Denmark
Thomas Mailund: Bioinformatics Research Centre, Aarhus University
Maria Luisa Matey-Hernandez: DTU Bioinformatics, Technical University of Denmark
Ole Mors: iSEQ, Centre for Integrative Sequencing, Aarhus University
Christian N. S. Pedersen: Bioinformatics Research Centre, Aarhus University
Thomas Sicheritz-Pontén: DTU Bioinformatics, Technical University of Denmark
Patrick Sullivan: Karolinska Institutet
Ali Syed: DTU Bioinformatics, Technical University of Denmark
David Westergaard: DTU Bioinformatics, Technical University of Denmark
Rachita Yadav: DTU Bioinformatics, Technical University of Denmark
Ning Li: BGI-Europe
Xun Xu: BGI-Shenzhen
Torben Hansen: Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen
Anders Krogh: Bioinformatics Centre, University of Copenhagen
Lars Bolund: Aarhus University
Thorkild I. A. Sørensen: Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen
Oluf Pedersen: Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen
Ramneek Gupta: DTU Bioinformatics, Technical University of Denmark
Simon Rasmussen: DTU Bioinformatics, Technical University of Denmark
Søren Besenbacher: Bioinformatics Research Centre, Aarhus University
Anders D. Børglum: iSEQ, Centre for Integrative Sequencing, Aarhus University
Jun Wang: iSEQ, Centre for Integrative Sequencing, Aarhus University
Hans Eiberg: University of Copenhagen
Karsten Kristiansen: BGI-Shenzhen
Søren Brunak: DTU Bioinformatics, Technical University of Denmark
Mikkel Heide Schierup: Bioinformatics Research Centre, Aarhus University

Nature, 2017, vol. 548, issue 7665, 87-91

Abstract: A report of high-depth, short-read sequencing and de novo assemblies for 150 individuals from 50 parent–offspring trios as part of establishing a population reference genome for the GenomeDenmark project.

Date: 2017
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DOI: 10.1038/nature23264

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