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Microbiota-derived 3-IAA influences chemotherapy efficacy in pancreatic cancer

Joseph Tintelnot (), Yang Xu, Till R. Lesker, Martin Schönlein, Leonie Konczalla, Anastasios D. Giannou, Penelope Pelczar, Dominik Kylies, Victor G. Puelles, Agata A. Bielecka, Manuela Peschka, Filippo Cortesi, Kristoffer Riecken, Maximilian Jung, Lena Amend, Tobias S. Bröring, Marija Trajkovic-Arsic, Jens T. Siveke, Thomas Renné, Danmei Zhang, Stefan Boeck, Till Strowig, Faik G. Uzunoglu, Cenap Güngör, Alexander Stein, Jakob R. Izbicki, Carsten Bokemeyer, Marianne Sinn, Alec C. Kimmelman, Samuel Huber and Nicola Gagliani ()
Additional contact information
Joseph Tintelnot: University Medical Center Hamburg-Eppendorf
Yang Xu: University Medical Center Hamburg-Eppendorf
Till R. Lesker: Helmholtz Centre for Infection Research
Martin Schönlein: University Medical Center Hamburg-Eppendorf
Leonie Konczalla: University Medical Center Hamburg-Eppendorf
Anastasios D. Giannou: University Medical Center Hamburg-Eppendorf
Penelope Pelczar: University Medical Center Hamburg- Eppendorf
Dominik Kylies: University Medical Center Hamburg-Eppendorf
Victor G. Puelles: University Medical Center Hamburg-Eppendorf
Agata A. Bielecka: Helmholtz Centre for Infection Research
Manuela Peschka: University Medical Center Hamburg-Eppendorf
Filippo Cortesi: University Medical Center Hamburg-Eppendorf
Kristoffer Riecken: University Medical Center Hamburg-Eppendorf
Maximilian Jung: University Medical Center Hamburg-Eppendorf
Lena Amend: Helmholtz Centre for Infection Research
Tobias S. Bröring: University Medical Center Hamburg-Eppendorf
Marija Trajkovic-Arsic: University Hospital Essen, University Duisburg-Essen
Jens T. Siveke: University Hospital Essen, University Duisburg-Essen
Thomas Renné: University Medical Center Hamburg-Eppendorf
Danmei Zhang: Ludwig-Maximilians-University (LMU) Hospital
Stefan Boeck: Ludwig-Maximilians-University (LMU) Hospital
Till Strowig: Helmholtz Centre for Infection Research
Faik G. Uzunoglu: University Medical Center Hamburg-Eppendorf
Cenap Güngör: University Medical Center Hamburg-Eppendorf
Alexander Stein: University Medical Center Hamburg-Eppendorf
Jakob R. Izbicki: University Medical Center Hamburg-Eppendorf
Carsten Bokemeyer: University Medical Center Hamburg-Eppendorf
Marianne Sinn: University Medical Center Hamburg-Eppendorf
Alec C. Kimmelman: New York University Grossman School of Medicine
Samuel Huber: University Medical Center Hamburg- Eppendorf
Nicola Gagliani: University Medical Center Hamburg-Eppendorf

Nature, 2023, vol. 615, issue 7950, 168-174

Abstract: Abstract Pancreatic ductal adenocarcinoma (PDAC) is expected to be the second most deadly cancer by 2040, owing to the high incidence of metastatic disease and limited responses to treatment1,2. Less than half of all patients respond to the primary treatment for PDAC, chemotherapy3,4, and genetic alterations alone cannot explain this5. Diet is an environmental factor that can influence the response to therapies, but its role in PDAC is unclear. Here, using shotgun metagenomic sequencing and metabolomic screening, we show that the microbiota-derived tryptophan metabolite indole-3-acetic acid (3-IAA) is enriched in patients who respond to treatment. Faecal microbiota transplantation, short-term dietary manipulation of tryptophan and oral 3-IAA administration increase the efficacy of chemotherapy in humanized gnotobiotic mouse models of PDAC. Using a combination of loss- and gain-of-function experiments, we show that the efficacy of 3-IAA and chemotherapy is licensed by neutrophil-derived myeloperoxidase. Myeloperoxidase oxidizes 3-IAA, which in combination with chemotherapy induces a downregulation of the reactive oxygen species (ROS)-degrading enzymes glutathione peroxidase 3 and glutathione peroxidase 7. All of this results in the accumulation of ROS and the downregulation of autophagy in cancer cells, which compromises their metabolic fitness and, ultimately, their proliferation. In humans, we observed a significant correlation between the levels of 3-IAA and the efficacy of therapy in two independent PDAC cohorts. In summary, we identify a microbiota-derived metabolite that has clinical implications in the treatment of PDAC, and provide a motivation for considering nutritional interventions during the treatment of patients with cancer.

Date: 2023
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DOI: 10.1038/s41586-023-05728-y

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