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Tuberculosis in otherwise healthy adults with inherited TNF deficiency

Andrés A. Arias, Anna-Lena Neehus (), Masato Ogishi, Vincent Meynier, Adam Krebs, Tomi Lazarov, Angela M. Lee, Carlos A. Arango-Franco, Rui Yang, Julio Orrego, Melissa Corcini Berndt, Julian Rojas, Hailun Li, Darawan Rinchai, Lucia Erazo-Borrás, Ji Eun Han, Bethany Pillay, Khoren Ponsin, Matthieu Chaldebas, Quentin Philippot, Jonathan Bohlen, Jérémie Rosain, Tom Voyer, Till Janotte, Krishnajina Amarajeeva, Camille Soudée, Marion Brollo, Katja Wiegmann, Quentin Marquant, Yoann Seeleuthner, Danyel Lee, Candice Lainé, Doreen Kloos, Rasheed Bailey, Paul Bastard, Narelle Keating, Franck Rapaport, Taushif Khan, Marcela Moncada-Vélez, María Camila Carmona, Catalina Obando, Jesús Alvarez, Juan Carlos Cataño, Larry Luber Martínez-Rosado, Juan P. Sanchez, Manuela Tejada-Giraldo, Anne-Sophie L’Honneur, María L. Agudelo, Lizet J. Perez-Zapata, Diana M. Arboleda, Juan Fernando Alzate, Felipe Cabarcas, Alejandra Zuluaga, Simon J. Pelham, Armin Ensser, Monika Schmidt, Margarita M. Velásquez-Lopera, Emmanuelle Jouanguy, Anne Puel, Martin Krönke, Stefano Ghirardello, Alessandro Borghesi, Susanta Pahari, Bertrand Boisson, Stefania Pittaluga, Cindy S. Ma, Jean-François Emile, Luigi D. Notarangelo, Stuart G. Tangye, Nico Marr, Nico Lachmann, Hélène Salvator, Larry S. Schlesinger, Peng Zhang, Michael S. Glickman, Carl F. Nathan, Frédéric Geissmann, Laurent Abel, José Luis Franco (), Jacinta Bustamante, Jean-Laurent Casanova () and Stéphanie Boisson-Dupuis
Additional contact information
Andrés A. Arias: University of Antioquia UdeA
Anna-Lena Neehus: INSERM U1163
Masato Ogishi: Rockefeller University
Vincent Meynier: INSERM U1163
Adam Krebs: Memorial Sloan Kettering Cancer Center
Tomi Lazarov: Memorial Sloan Kettering Cancer Center
Angela M. Lee: Weill Cornell Medicine
Carlos A. Arango-Franco: University of Antioquia UdeA
Rui Yang: Rockefeller University
Julio Orrego: University of Antioquia UdeA
Melissa Corcini Berndt: INSERM U1163
Julian Rojas: University of Antioquia UdeA
Hailun Li: INSERM U1163
Darawan Rinchai: Rockefeller University
Lucia Erazo-Borrás: University of Antioquia UdeA
Ji Eun Han: Rockefeller University
Bethany Pillay: Garvan Institute of Medical Research
Khoren Ponsin: Rockefeller University
Matthieu Chaldebas: Rockefeller University
Quentin Philippot: INSERM U1163
Jonathan Bohlen: INSERM U1163
Jérémie Rosain: INSERM U1163
Tom Voyer: INSERM U1163
Till Janotte: INSERM U1163
Krishnajina Amarajeeva: INSERM U1163
Camille Soudée: INSERM U1163
Marion Brollo: Paris Saclay University, INRAe UVSQ
Katja Wiegmann: University of Cologne
Quentin Marquant: Paris Saclay University, INRAe UVSQ
Yoann Seeleuthner: INSERM U1163
Danyel Lee: Rockefeller University
Candice Lainé: INSERM U1163
Doreen Kloos: Hannover Medical School
Rasheed Bailey: Rockefeller University
Paul Bastard: Rockefeller University
Narelle Keating: Rockefeller University
Franck Rapaport: Rockefeller University
Taushif Khan: The Jackson Laboratory
Marcela Moncada-Vélez: University of Antioquia UdeA
María Camila Carmona: University of Antioquia UdeA
Catalina Obando: University of Antioquia UdeA
Jesús Alvarez: University of Antioquia UdeA
Juan Carlos Cataño: University of Antioquia UdeA
Larry Luber Martínez-Rosado: La Maria Hospital
Juan P. Sanchez: University of Antioquia UdeA
Manuela Tejada-Giraldo: University of Antioquia UdeA
Anne-Sophie L’Honneur: AP-HP
María L. Agudelo: University of Antioquia UdeA
Lizet J. Perez-Zapata: University of Antioquia UdeA
Diana M. Arboleda: University of Antioquia UdeA
Juan Fernando Alzate: University of Antioquia UdeA
Felipe Cabarcas: University of Antioquia UdeA
Alejandra Zuluaga: Corporation for Biological Research (CIB)
Simon J. Pelham: Rockefeller University
Armin Ensser: Friedrich-Alexander Universität Erlangen-Nürnberg
Monika Schmidt: Friedrich-Alexander Universität Erlangen-Nürnberg
Margarita M. Velásquez-Lopera: University of Antioquia UdeA
Emmanuelle Jouanguy: Rockefeller University
Anne Puel: Rockefeller University
Martin Krönke: University of Cologne
Stefano Ghirardello: San Matteo Research Hospital
Alessandro Borghesi: San Matteo Research Hospital
Susanta Pahari: Texas Biomedical Research Institute
Bertrand Boisson: Rockefeller University
Stefania Pittaluga: NIH
Cindy S. Ma: Garvan Institute of Medical Research
Jean-François Emile: Ambroise Paré Hospital, AP-HP
Luigi D. Notarangelo: NIH
Stuart G. Tangye: Garvan Institute of Medical Research
Nico Marr: Sidra Medicine
Nico Lachmann: Hannover Medical School
Hélène Salvator: AP-HP, Saint-Louis Hospital
Larry S. Schlesinger: Texas Biomedical Research Institute
Peng Zhang: Rockefeller University
Michael S. Glickman: Memorial Sloan Kettering Cancer Center
Carl F. Nathan: Weill Cornell Medicine
Frédéric Geissmann: Memorial Sloan Kettering Cancer Center
Laurent Abel: Rockefeller University
José Luis Franco: University of Antioquia UdeA
Jacinta Bustamante: Rockefeller University
Jean-Laurent Casanova: Rockefeller University
Stéphanie Boisson-Dupuis: Rockefeller University

Nature, 2024, vol. 633, issue 8029, 417-425

Abstract: Abstract Severe defects in human IFNγ immunity predispose individuals to both Bacillus Calmette–Guérin disease and tuberculosis, whereas milder defects predispose only to tuberculosis1. Here we report two adults with recurrent pulmonary tuberculosis who are homozygous for a private loss-of-function TNF variant. Neither has any other clinical phenotype and both mount normal clinical and biological inflammatory responses. Their leukocytes, including monocytes and monocyte-derived macrophages (MDMs) do not produce TNF, even after stimulation with IFNγ. Blood leukocyte subset development is normal in these patients. However, an impairment in the respiratory burst was observed in granulocyte–macrophage colony-stimulating factor (GM-CSF)-matured MDMs and alveolar macrophage-like (AML) cells2 from both patients with TNF deficiency, TNF- or TNFR1-deficient induced pluripotent stem (iPS)-cell-derived GM-CSF-matured macrophages, and healthy control MDMs and AML cells differentiated with TNF blockers in vitro, and in lung macrophages treated with TNF blockers ex vivo. The stimulation of TNF-deficient iPS-cell-derived macrophages with TNF rescued the respiratory burst. These findings contrast with those for patients with inherited complete deficiency of the respiratory burst across all phagocytes, who are prone to multiple infections, including both Bacillus Calmette–Guérin disease and tuberculosis3. Human TNF is required for respiratory-burst-dependent immunity to Mycobacterium tuberculosis in macrophages but is surprisingly redundant otherwise, including for inflammation and immunity to weakly virulent mycobacteria and many other infectious agents.

Date: 2024
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DOI: 10.1038/s41586-024-07866-3

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