A Test of Positive Association for Detecting Heterogeneity in Capture for Capture–Recapture Data

Anita Jeyam (), Rachel S. McCrea, Thomas Bregnballe, Morten Frederiksen and Roger Pradel
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Anita Jeyam: University of Kent
Rachel S. McCrea: University of Kent
Thomas Bregnballe: Aarhus University
Morten Frederiksen: Aarhus University
Roger Pradel: Centre d’Ecologie Fonctionnelle et Evolutive UMR 5175, CNRS - Université de Montpellier - Université Paul-Valéry

Journal of Agricultural, Biological and Environmental Statistics, 2018, vol. 23, issue 1, No 1, 19 pages

Abstract: Abstract The Cormack–Jolly–Seber (CJS) model assumes that all marked animals have equal recapture probabilities at each sampling occasion, but heterogeneity in capture often occurs and should be taken into account to avoid biases in parameter estimates. Although diagnostic tests are generally used to detect trap-dependence or transience and assess the overall fit of the model, heterogeneity in capture is not routinely tested for. In order to detect and identify this phenomenon in a CJS framework, we propose a test of positive association between previous and future encounters using Goodman–Kruskal’s gamma. This test is based solely on the raw capture histories and makes no assumption on model structure. The development of the test is motivated by a dataset of Sandwich terns (Thalasseus sandvicensis), and we use the test to formally show that they exhibit heterogeneity in capture. We use simulation to assess the performance of the test in the detection of heterogeneity in capture, compared to existing and corrected diagnostic goodness-of-fit tests, Leslie’s test of equal catchability and Carothers’ extension of the Leslie test. The test of positive association is easy to use and produces good results, demonstrating high power to detect heterogeneity in capture. We recommend using this new test prior to model fitting as the outcome will guide the model-building process and help draw more accurate biological conclusions. Supplementary materials accompanying this paper appear online.

Keywords: Cormack–Jolly–Seber model; Goodman–Kruskal’s gamma; Goodness-of-fit (search for similar items in EconPapers)
Date: 2018
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DOI: 10.1007/s13253-017-0315-4

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