A FAST AND EFFECTIVE CONFORMATIONAL SEARCH METHOD FOR PEPTIDES

Handan Arkin and Tarik Çelik ()
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Handan Arkin: Department of Physics Engineering, Hacettepe University, 06532, Ankara, Turkey
Tarik Çelik: Department of Physics Engineering, Hacettepe University, 06532, Ankara, Turkey

International Journal of Modern Physics C (IJMPC), 2003, vol. 14, issue 07, 985-991

Abstract: We propose a hybrid algorithm, which combines the features of the energy landscape paving (ELP) and Monte Carlo Minimization (MCM) methods. We have tested its performance in studying the low-energy conformations of the heptapeptide deltorphin.

Keywords: Conformation sampling; energy landscape paving; peptides; energy minimization (search for similar items in EconPapers)
Date: 2003
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DOI: 10.1142/S0129183103005121

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