Biometrics

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From The International Biometric Society
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Volume 69, issue 4, 2013

Calibrating Sensitivity Analyses to Observed Covariates in Observational Studies pp. 803-811

Jesse Y. Hsu and Dylan S. Small

Sharpening Bounds on Principal Effects with Covariates pp. 812-819

Dustin M. Long and Michael G. Hudgens

Assessing the Causal Effect of Organ Transplantation on the Distribution of Residual Lifetime pp. 820-829

David M. Vock, Anastasios A. Tsiatis, Marie Davidian, Eric B. Laber, Wayne M. Tsuang, C. Ashley Finlen Copeland and Scott M. Palmer

Doubly-Robust Estimators of Treatment-Specific Survival Distributions in Observational Studies with Stratified Sampling pp. 830-839

Xiaofei Bai, Anastasios A. Tsiatis and Sean M. O'Brien

Efficient Semiparametric Estimation of Short-Term and Long-Term Hazard Ratios with Right-Censored Data pp. 840-849

Guoqing Diao, Donglin Zeng and Song Yang

Bias and Sensitivity Analysis When Estimating Treatment Effects from the Cox Model with Omitted Covariates pp. 850-860

Nan Xuan Lin, Stuart Logan and William Edward Henley

Omnibus Risk Assessment via Accelerated Failure Time Kernel Machine Modeling pp. 861-873

Jennifer A. Sinnott and Tianxi Cai

New Agreement Measures Based on Survival Processes pp. 874-882

Ying Guo, Ruosha Li, Limin Peng and Amita K. Manatunga

Linear Score Tests for Variance Components in Linear Mixed Models and Applications to Genetic Association Studies pp. 883-892

Long Qu, Tobias Guennel and Scott L. Marshall

Multiple Self-Controlled Case Series for Large-Scale Longitudinal Observational Databases pp. 893-902

Shawn E. Simpson, David Madigan, Ivan Zorych, Martijn J. Schuemie, Patrick B. Ryan and Marc A. Suchard

Multilevel Cross-Dependent Binary Longitudinal Data pp. 903-913

Nicoleta Serban, Ana-Maria Staicu and Raymond J. Carroll

Bayesian Latent-Class Mixed-Effect Hybrid Models for Dyadic Longitudinal Data with Non-Ignorable Dropouts pp. 914-924

Jaeil Ahn, Suyu Liu, Wenyi Wang and Ying Yuan

Bayesian Analysis of Time-Series Data under Case-Crossover Designs: Posterior Equivalence and Inference pp. 925-936

Shi Li, Bhramar Mukherjee, Stuart Batterman and Malay Ghosh

Bayesian Experimental Design for Models with Intractable Likelihoods pp. 937-948

Christopher C. Drovandi and Anthony N. Pettitt

Repeated Randomization and Matching in Multi-Arm Trials pp. 949-959

Zhenzhen Xu and John D. Kalbfleisch

Validity of Tests under Covariate-Adaptive Biased Coin Randomization and Generalized Linear Models pp. 960-969

Jun Shao and Xinxin Yu

A Hierarchical Model for Probabilistic Independent Component Analysis of Multi-Subject fMRI Studies pp. 970-981

Ying Guo and Li Tang

Testing for the Multivariate Stochastic Order among Ordered Experimental Groups with Application to Dose–Response Studies pp. 982-990

Ori Davidov and Shyamal Peddada

Breeding Return Times and Abundance in Capture–Recapture Models pp. 991-1001

Shirley Pledger, Edward Baker and Kim Scribner

Hybrid Pairwise Likelihood Analysis of Animal Behavior Experiments pp. 1002-1011

Manuela Cattelan and Cristiano Varin

Modeling Individual Specific Fish Length from Capture–Recapture Data using the von Bertalanffy Growth Curve pp. 1012-1021

Matthew R. Schofield, Richard J. Barker and Peter Taylor

A Comparison of Marginal and Conditional Models for Capture–Recapture Data with Application to Human Rights Violations Data pp. 1022-1032

Shira Mitchell, Al Ozonoff, Alan M. Zaslavsky, Bethany Hedt-Gauthier, Kristian Lum and Brent A. Coull

A Generalization of Chao's Estimator for Covariate Information pp. 1033-1042

Dankmar Böhning, Alberto Vidal-Diez, Rattana Lerdsuwansri, Chukiat Viwatwongkasem and Mark Arnold

Dynamic Pseudo-Observations: A Robust Approach to Dynamic Prediction in Competing Risks pp. 1043-1052

M. A. Nicolaie, J. C. van Houwelingen, T. M. de Witte and H. Putter

A Logistic Normal Multinomial Regression Model for Microbiome Compositional Data Analysis pp. 1053-1063

Fan Xia, Jun Chen, Wing Kam Fung and Hongzhe Li

Two-Stage Hierarchical Group Testing for Multiple Infections with Application to the Infertility Prevention Project pp. 1064-1073

Joshua M. Tebbs, Christopher S. McMahan and Christopher R. Bilder

Bayesian Spatial Transformation Models with Applications in Neuroimaging Data pp. 1074-1083

Michelle F. Miranda, Hongtu Zhu and Joseph G. Ibrahim

Letter to the Editor: “Comment on Hubbard and Miglioretti (2013), Consider Also a Selection Model for the Cumulative Risk of False Positive Screening Tests” pp. 1084-1084

Stuart G. Baker

Medical Biostatistics, 3rd edition by INDRAYAN, ABHAYA pp. 1086-1087

Mira Park

Introduction to Linear Regression Analysis, 5th edition by MONTGOMERY, DOUGLAS C., PECK, ELIZABETH A., and VINING, G. GEOFFREY pp. 1087-1087

Hee-Seok Oh

Statistical Methods with Applications to Demography and Life Insurance by KHMALADZE, ESTATE V pp. 1087-1088

Dong Wan Shin

Categorical Data Analysis, 3rd edition by AGRESTI, ALAN pp. 1088-1089

Donguk Kim

Volume 69, issue 3, 2013

Surrogate Measures and Consistent Surrogates pp. 561-565

Tyler J. VanderWeele

Discussion on “Surrogate Measures and Consistent Surrogates” pp. 565-569

Michael R. Elliott, Anna Conlon and Yun Li

Discussion on “Surrogate Measures and Consistent Surrogates” pp. 569-573

Marshall M. Joffe

Discussion on “Surrogate Measures and Consistent Surrogates” pp. 573-577

Judea Pearl

Rejoinder pp. 577-581

Tyler J. VanderWeele

Network‐Based Penalized Regression With Application to Genomic Data pp. 582-593

Sunkyung Kim, Wei Pan and Xiaotong Shen

An Optimal Test with Maximum Average Power While Controlling FDR with Application to RNA‐Seq Data pp. 594-605

Yaqing Si and Peng Liu

FDR Control with Pseudo‐Gatekeeping Based on a Possibly Data Driven Order of the Hypotheses pp. 606-613

Alessio Farcomeni and L. Finos

A Decision‐Theory Approach to Interpretable Set Analysis for High‐Dimensional Data pp. 614-623

Simina M. Boca, Héctor Corrada Bravo, Brian Caffo, Jeffrey T. Leek and Giovanni Parmigiani

Shrinkage Empirical Likelihood Estimator in Longitudinal Analysis with Time‐Dependent Covariates—Application to Modeling the Health of Filipino Children pp. 624-632

Denis Heng‐Yan Leung, Dylan S. Small, Jing Qin and Min Zhu

GEE for Multinomial Responses Using a Local Odds Ratios Parameterization pp. 633-640

Anestis Touloumis, Alan Agresti and Maria Kateri

A Natural Robustification of the Ordinary Instrumental Variables Estimator pp. 641-650

Gabriela V. Cohen Freue, Hernan Ortiz‐Molina and Ruben H. Zamar

Bayesian Quantile Regression for Censored Data pp. 651-660

Brian J. Reich and Luke B. Smith

Bayesian Approach for Clinical Trial Safety Data Using an Ising Prior pp. 661-672

Bradley W. McEvoy, Rajesh R. Nandy and Ram C. Tiwari

Using Joint Utilities of the Times to Response and Toxicity to Adaptively Optimize Schedule–Dose Regimes pp. 673-682

Peter F. Thall, Hoang Q. Nguyen, Thomas M. Braun and Muzaffar H. Qazilbash

Modeling Parasite Infection Dynamics when there Is Heterogeneity and Imperfect Detectability pp. 683-692

Na Cui, Yuguo Chen and Dylan S. Small

Correcting the Optimal Resampling‐Based Error Rate by Estimating the Error Rate of Wrapper Algorithms pp. 693-702

Christoph Bernau, Thomas Augustin and Anne‐Laure Boulesteix

Using Hidden Markov Models to Deal with Availability Bias on Line Transect Surveys pp. 703-713

D. L. Borchers, W. Zucchini, M. P. Heide‐Jørgensen, A. Cañadas and R. Langrock

Inference for Optimal Dynamic Treatment Regimes Using an Adaptive m‐Out‐of‐n Bootstrap Scheme pp. 714-723

Bibhas Chakraborty, Eric B. Laber and Yingqi Zhao

Treatment Benefit and Treatment Harm Rate to Characterize Heterogeneity in Treatment Effect pp. 724-731

Changyu Shen, Jaesik Jeong, Xiaochun Li, Peng‐Sheng Chen and Alfred Buxton

Modeling Clinical Endpoints as a Function of Time of Switch to Second‐Line ART with Incomplete Data on Switching Times pp. 732-740

Brent A. Johnson, Heather Ribaudo, Roy M. Gulick and Joseph J. Eron

Mechanistic Analysis of Challenge–Response Experiments pp. 741-747

M. S. Shotwell, K. J. Drake, V. Y. Sidorov and J. P. Wikswo

Estimating the Transmission Dynamics of Streptococcus pneumoniae from Strain Prevalence Data pp. 748-757

Elina Numminen, Lu Cheng, Mats Gyllenberg and Jukka Corander

On Population Size Estimators in the Poisson Mixture Model pp. 758-765

Chang Xuan Mao, Nan Yang and Jinhua Zhong

Mark‐Recapture with Multiple, Non‐Invasive Marks pp. 766-775

Simon J Bonner and Jason Holmberg

BAS: Balanced Acceptance Sampling of Natural Resources pp. 776-784

B. L. Robertson, J. A. Brown, T. McDonald and P. Jaksons

Latent factor regression models for grouped outcomes pp. 785-794

D. B. Woodard, T. M. T. Love, S. W. Thurston, D. Ruppert, S. Sathyanarayana and S. H. Swan

Comment on Cai and Betensky (2003), On the Poisson Approximation for Hazard Regression pp. 795-795

Daniel Sabanés Bové and Leonhard Held

Reply to Sabanés Bové and Held's “Comment on Cai and Betensky (2003), On the Poisson Approximation for Hazard Regression” pp. 796-796

Tianxi Cai and Rebecca Betensky

Case Studies in Bayesian Statistical Modelling and Analysis by ALSTON, C.L., MENGERSEN, K.L. and PETTITT, A.N pp. 798-798

Jaeyong Lee

Generalized Estimating Equations by HARDIN, J. W. and HILBE, J. M pp. 799-799

Woncheol Jang

Spatio‐Temporal Design: Advances in Efficient Data Acquisition by MATEU, J. and MÜLLER, W. G pp. 800-800

Johan Lim

Handbook of Markov Chain Monte Carlo by BROOKS, S., GELMAN, A., JONES, G. L. and MENG, X pp. 801-801

Hedibert Freitas Lopes

Volume 69, issue 2, 2013

Presidential Address: XXVI International Biometric Conference, Kobe, Japan, August 2012 Education in Developing Countries ’ The Role of IBS pp. 295-299

C. G. B. Demétrio

IBS: Transformation of Our Governance pp. 300-300

Kaye E. Basford

Design and Estimation for Evaluating Principal Surrogate Markers in Vaccine Trials pp. 301-309

Ying Huang, Peter B. Gilbert and Julian Wolfson

Identification and Efficient Estimation of the Natural Direct Effect among the Untreated pp. 310-317

Samuel D. Lendle, Meenakshi S. Subbaraman and Mark J. van der Laan

A Causal Model for Joint Evaluation of Placebo and Treatment-Specific Effects in Clinical Trials pp. 318-327

Zhiwei Zhang, Richard M. Kotz, Chenguang Wang, Shiling Ruan and Martin Ho

Mark-Specific Hazard Ratio Model with Multivariate Continuous Marks: An Application to Vaccine Efficacy pp. 328-337

M. Juraska and P. B. Gilbert

Partly Conditional Estimation of the Effect of a Time-Dependent Factor in the Presence of Dependent Censoring pp. 338-347

Qi Gong and Douglas E. Schaubel

Partially Linear Structure Selection in Cox Models with Varying Coefficients pp. 348-357

Heng Lian, Peng Lai and Hua Liang

Weighted Least-Squares Method for Right-Censored Data in Accelerated Failure Time Model pp. 358-365

Lili Yu, Liang Liu and Ding-Geng(Din) Chen

An Estimating Function Approach to the Analysis of Recurrent and Terminal Events pp. 366-374

John D. Kalbfleisch, Douglas E. Schaubel, Yining Ye and Qi Gong

Quantile Regression for Recurrent Gap Time Data pp. 375-385

Xianghua Luo, Chiung-Yu Huang and Lan Wang

Generalized Partially Linear Models for Incomplete Longitudinal Data In the Presence of Population-Level Information pp. 386-395

Baojiang Chen and Xiao-Hua Zhou

Recovering Gradients from Sparsely Observed Functional Data pp. 396-404

Sara López-Pintado and Ian W. McKeague

Outcome Vector Dependent Sampling with Longitudinal Continuous Response Data: Stratified Sampling Based on Summary Statistics pp. 405-416

Jonathan S. Schildcrout, Shawn P. Garbett and Patrick J. Heagerty

A Joint Regression Analysis for Genetic Association Studies with Outcome Stratified Samples pp. 417-426

Colin O. Wu, Gang Zheng and Minjung Kwak

A Generalized Kruskal–Wallis Test Incorporating Group Uncertainty with Application to Genetic Association Studies pp. 427-435

Elif F. Acar and Lei Sun

Regularization in Finite Mixture of Regression Models with Diverging Number of Parameters pp. 436-446

Abbas Khalili and Shili Lin

Joint High-Dimensional Bayesian Variable and Covariance Selection with an Application to eQTL Analysis pp. 447-457

Anindya Bhadra and Bani K. Mallick

A Strategy for Bayesian Inference for Computationally Expensive Models with Application to the Estimation of Stem Cell Properties pp. 458-468

Antony M. Overstall and David C. Woods

Bayesian Inference for Two-Phase Studies with Categorical Covariates pp. 469-477

Michelle Ross and Jon Wakefield

Objective Bayesian Search of Gaussian Directed Acyclic Graphical Models for Ordered Variables with Non-Local Priors pp. 478-487

Davide Altomare, Guido Consonni and Luca La Rocca

Exact Goodness-of-Fit Tests for Markov Chains pp. 488-496

J. Besag and D. Mondal

Stationarity Tests for Spatial Point Processes using Discrepancies pp. 497-507

Sung Nok Chiu and Kwong Ip Liu

A Bayesian Goodness of Fit Test and Semiparametric Generalization of Logistic Regression with Measurement Data pp. 508-519

Angela Schörgendorfer, Adam J. Branscum and Timothy E. Hanson

Naive Hypothesis Testing for Case Series Analysis with Time-Varying Exposure Onset Measurement Error: Inference for Infection-Cardiovascular Risk in Patients on Dialysis pp. 520-529

Sandra M. Mohammed, Lorien S. Dalrymple, Damla Şentürk and Danh V. Nguyen

A Revisit to Sample Size and Power Calculations for Testing Odds Ratio in Two Independent Binomials pp. 530-536

Fang Liu

Distributed Lag Models for Hydrological Data pp. 537-544

Alastair M. Rushworth, Adrian W. Bowman, Mark J. Brewer and Simon J. Langan

Bridging Conditional and Marginal Inference for Spatially Referenced Binary Data pp. 545-554

Laura Boehm, Brian J. Reich and Dipankar Bandyopadhyay

Spatio-Temporal Heterogeneity: Concepts and Analyses by DUTILLEUL, P.R.L pp. 557-558

Jun Zhu

Programming Graphical User Interfaces by LAWRENCE, M.L. and VERZANI, J pp. 558-559

Fernando Tusell-Palmer

Simultaneous Inference in Regression by LIU, W pp. 559-560

Aldo Solari

Volume 69, issue 1, 2013

Estimation of False Discovery Rate Using Sequential Permutation p-Values pp. 1-7

Tim Bancroft, Chuanlong Du and Dan Nettleton

Gaussian Process-Based Bayesian Nonparametric Inference of Population Size Trajectories from Gene Genealogies pp. 8-18

Julia A. Palacios and Vladimir N. Minin

Hierarchical Factor Models for Large Spatially Misaligned Data: A Low-Rank Predictive Process Approach pp. 19-30

Qian Ren and Sudipto Banerjee

Wavelet-Based Clustering for Mixed-Effects Functional Models in High Dimension pp. 31-40

M. Giacofci, S. Lambert-Lacroix, G. Marot and F. Picard

Corrected Confidence Bands for Functional Data Using Principal Components pp. 41-51

J. Goldsmith, S. Greven and C. Crainiceanu

Latent Subgroup Analysis of a Randomized Clinical Trial through a Semiparametric Accelerated Failure Time Mixture Model pp. 52-61

L. Altstein and G. Li

A Risk-Adjusted O–E CUSUM with Monitoring Bands for Monitoring Medical Outcomes pp. 62-69

Rena Jie Sun and John D. Kalbfleisch

Factor Selection and Structural Identification in the Interaction ANOVA Model pp. 70-79

Justin B. Post and Howard D. Bondell

A Regularization Corrected Score Method for Nonlinear Regression Models with Covariate Error pp. 80-90

David M. Zucker, Malka Gorfine, Yi Li, Mahlet G. Tadesse and Donna Spiegelman

Covariate Adjustment in Estimating the Area Under ROC Curve with Partially Missing Gold Standard pp. 91-100

Danping Liu and Xiao-Hua Zhou

A Path-Specific SEIR Model for use with General Latent and Infectious Time Distributions pp. 101-108

Aaron T. Porter and Jacob J. Oleson

Prevalence Projections of Chronic Diseases and Impact of Public Health Intervention pp. 109-117

Pierre Joly, Célia Touraine, Aurore Georget, Jean-François Dartigues, Daniel Commenges and Hélène Jacqmin-Gadda

Impact of Multiple Matched Controls on Design Sensitivity in Observational Studies pp. 118-127

Paul R. Rosenbaum

A Positive Event Dependence Model for Self-Controlled Case Series with Applications in Postmarketing Surveillance pp. 128-136

Shawn E. Simpson

Testing for Homogeneity of Multivariate Dispersions Using Dissimilarity Measures pp. 137-145

Irène Gijbels and Marek Omelka

Estimating Open Population Site Occupancy from Presence–Absence Data Lacking the Robust Design pp. 146-156

D. Dail and L. Madsen

Bayesian Hypothesis Testing in Two-Arm Trials with Dichotomous Outcomes pp. 157-163

Boris G. Zaslavsky

A Novel Bayesian Semiparametric Algorithm for Inferring Population Structure and Adjusting for Case-Control Association Tests pp. 164-173

Arunabha Majumdar, Sourabh Bhattacharya, Analabha Basu and Saurabh Ghosh

Semiparametric Bayesian Inference for Phage Display Data pp. 174-183

Luis G. León-Novelo, Peter Müller, Wadih Arap, Mikhail Kolonin, Jessica Sun, Renata Pasqualini and Kim-Anh Do

A Wavelet-Based Bayesian Approach to Regression Models with Long Memory Errors and Its Application to fMRI Data pp. 184-196

Jaesik Jeong, Marina Vannucci and Kyungduk Ko

Exploration of Lagged Associations using Longitudinal Data pp. 197-205

Patrick J. Heagerty and Bryan A. Comstock

Real-Time Individual Predictions of Prostate Cancer Recurrence Using Joint Models pp. 206-213

Jeremy M. G. Taylor, Yongseok Park, Donna P. Ankerst, Cecile Proust-Lima, Scott Williams, Larry Kestin, Kyoungwha Bae, Tom Pickles and Howard Sandler

Modeling Seroadaptation and Sexual Behavior Among HIV-super-+ Study Participants with a Simultaneously Multilevel and Multivariate Longitudinal Count Model pp. 214-224

Yuda Zhu and Robert E. Weiss

Estimating Time to Disease Progression Comparing Transition Models and Survival Methods—An Analysis of Multiple Sclerosis Data pp. 225-234

Micha Mandel, Francois Mercier, Benjamin Eckert, Peter Chin and Rebecca A. Betensky

Estimating Strain-Specific and Overall Efficacy of Polyvalent Vaccines Against Recurrent Pathogens From a Cross-Sectional Study pp. 235-244

Kari Auranen, Hanna Rinta-Kokko and M. Elizabeth Halloran

A Semiparametric Censoring Bias Model for Estimating the Cumulative Risk of a False-Positive Screening Test Under Dependent Censoring pp. 245-253

Rebecca A. Hubbard and Diana L. Miglioretti

An Application of Targeted Maximum Likelihood Estimation to the Meta-Analysis of Safety Data pp. 254-262

Susan Gruber and Mark J. van der Laan

Model Feedback in Bayesian Propensity Score Estimation pp. 263-273

Corwin M. Zigler, Krista Watts, Robert W. Yeh, Yun Wang, Brent A. Coull and Francesca Dominici

Equivalence of MAXENT and Poisson Point Process Models for Species Distribution Modeling in Ecology pp. 274-281

Ian W. Renner and David I. Warton

A Note on Using Regression Models to Analyze Randomized Trials: Asymptotically Valid Hypothesis Tests Despite Incorrectly Specified Models pp. 282-289

Jane Paik Kim

Rejoinder to “A Note on Using Regression Models to Analyze Randomized Trials: Asymptotically Valid Hypothesis Tests Despite Incorrectly Specified Models” pp. 290-290

Michael Rosenblum and Mark J. van der Laan

Statistics of Medical Imaging by LEI, T pp. 291-292

Hongtu Zhu

Bayesian Smoothing and Regression for Longitudinal, Spatial and Event History Data by FAHRMEIR, L. and KNEIB, T pp. 292-292

Renato Assunção

Targeted Learning by VAN DER LAAN, M. and ROSE, S pp. 293-293

Andrea Rotnitzky